RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 MXD4Q14582 209 aaPredicted RBP21.29■■□□□ 1
CSNK1D-203ENST00000392334 SEZ6Q53EL9 994 aa21.29■■□□□ 1
CSNK1D-203ENST00000392334 ZNF484Q5JVG2 852 aa21.29■■□□□ 1
CSNK1D-203ENST00000392334 AP1M1Q9BXS5 423 aa21.29■■□□□ 1
CSNK1D-203ENST00000392334 DDX47Q9H0S4 455 aaKnown RBP21.29■■□□□ 1
CSNK1D-203ENST00000392334 PPME1Q9Y570 386 aa21.29■■□□□ 1
CSNK1D-203ENST00000392334 VTNP04004 478 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 CTNNA1P35221 906 aaKnown RBP21.28■■□□□ 1
CSNK1D-203ENST00000392334 ACOT2P49753 483 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 POU5F1Q01860 360 aaKnown RBP21.28■■□□□ 1
CSNK1D-203ENST00000392334 C1orf220Q5T0J3 134 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 SWT1Q5T5J6 900 aaKnown RBP21.28■■□□□ 1
CSNK1D-203ENST00000392334 FMNL3Q8IVF7 1028 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 SETD4Q9NVD3 440 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 AMFRQ9UKV5 643 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 A6NJR5 290 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 GNRH1P01148 92 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 PAEPP09466 180 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 USP8P40818 1118 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 GTF2A1P52655 376 aaPredicted RBP21.28■■□□□ 1
CSNK1D-203ENST00000392334 PPP2R5EQ16537 467 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 C6orf89Q6UWU4 347 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 EXOC8Q8IYI6 725 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 TMEM174Q8WUU8 243 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 SYT11Q9BT88 431 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 AKT3Q9Y243 479 aa21.28■■□□□ 1
CSNK1D-203ENST00000392334 MYO1FO00160 1098 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 GAS2O43903 313 aaKnown RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 TMEM253P0C7T8 217 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 DLATP10515 647 aaKnown RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 SOX5P35711 763 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 GALCP54803 685 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 MYL7Q01449 175 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 GRIK4Q16099 956 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 ZBTB41Q5SVQ8 909 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 MTHFD1LQ6UB35 978 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 TMC3Q7Z5M5 1100 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 ZBTB33Q86T24 672 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 DAAM2Q86T65 1068 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 CDR2LQ86X02 465 aaPredicted RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 DDX42Q86XP3 938 aaKnown RBP eCLIP21.27■■□□□ 1
CSNK1D-203ENST00000392334 GPD1LQ8N335 351 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 LNX1Q8TBB1 728 aaPredicted RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 IPO4Q8TEX9 1081 aaKnown RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 U2AF1L4Q8WU68 220 aaKnown RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 JPH2Q9BR39 696 aaPredicted RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 STK33Q9BYT3 514 aa21.27■■□□□ 1
CSNK1D-203ENST00000392334 TOPORSQ9NS56 1045 aaPredicted RBP21.27■■□□□ 1
CSNK1D-203ENST00000392334 INO80B-WBP1J3KQ70 363 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 HOXD8P13378 290 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 HNRNPH1P31943 449 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 NLRP11P59045 1033 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 MARCH8Q5T0T0 291 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 RFFLQ8WZ73 363 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 INO80BQ9C086 356 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 TMEM134Q9H6X4 195 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 MINDY3Q9H8M7 445 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 PTCH2Q9Y6C5 1203 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 EVI5O60447 810 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 HMGCRP04035 888 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 MYL3P08590 195 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 ITGA4P13612 1032 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 GARTP22102 1010 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 SEC24CP53992 1094 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 ZBTB8OSQ8IWT0 167 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 ELMO3Q96BJ8 720 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 TCHPQ9BT92 498 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 AMACRQ9UHK6 382 aa21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 AGO2Q9UKV8 859 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-203ENST00000392334 F8VZ95 297 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 SEPT4O43236 478 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 B4GALT5O43286 388 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 DAPK3O43293 454 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 MSCO60682 206 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 PGK1P00558 417 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 PRKCBP05771 671 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 IQCF3P0C7M6 154 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 CLUL1Q15846 466 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 LMBRD2Q68DH5 695 aaPredicted RBP21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 DNAAF5Q86Y56 855 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 PXYLP1Q8TE99 480 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 PARD3BQ8TEW8 1205 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 MSTO1Q9BUK6 570 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 CCDC113Q9H0I3 377 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 AP5M1Q9H0R1 490 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 UTP11Q9Y3A2 253 aaKnown RBP21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 CAPN7Q9Y6W3 813 aa21.25■□□□□ 0.99
CSNK1D-203ENST00000392334 A0A087WZ62 844 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 GMNCA6NCL1 334 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 E7EVH7 732 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 DDX3YO15523 660 aaKnown RBP21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 TRAPPC3O43617 180 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 DUSP11O75319 330 aaKnown RBP21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 ABCD1P33897 745 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 EFNA5P52803 228 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 WNT7BP56706 349 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 PPP2R2AP63151 447 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 TMEM62Q0P6H9 643 aa21.24■□□□□ 0.99
CSNK1D-203ENST00000392334 ARHGEF6Q15052 776 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms