RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 SNX12Q9UMY4 172 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 CALCAP01258 141 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 KRT19P08727 400 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 YY1P25490 414 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 HTRA3P83110 453 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 RSPH3Q86UC2 560 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
TMCO1-202ENST00000392129 RBBP8NLQ8NC74 664 aaPredicted RBP13.13□□□□□ -0.31
TMCO1-202ENST00000392129 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 SLC35G2Q8TBE7 412 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 RFFLQ8WZ73 363 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
TMCO1-202ENST00000392129 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMCO1-202ENST00000392129 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
TMCO1-202ENST00000392129 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
TMCO1-202ENST00000392129 ANK1P16157 1881 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 NCANO14594 1321 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 ITGB3P05106 788 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 ZNF132P52740 706 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 GPC5P78333 572 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
TMCO1-202ENST00000392129 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 LRRC57Q8N9N7 239 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 ARHGEF26Q96DR7 871 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 TRIM6Q9C030 488 aaPredicted RBP13.12□□□□□ -0.31
TMCO1-202ENST00000392129 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
TMCO1-202ENST00000392129 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
TMCO1-202ENST00000392129 FAM170AA1A519 330 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 M0QZ92 97 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 NCK2O43639 380 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 FKTNO75072 461 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 FTCDO95954 541 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 GNA15P30679 374 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ATICP31939 592 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ASPAP45381 313 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 YARSP54577 528 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 WDR72Q3MJ13 1102 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 MEI1Q5TIA1 1274 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 RNF180Q86T96 592 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 TMEM130Q8N3G9 435 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 UBXN4Q92575 508 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 WNT8BQ93098 351 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 SNX27Q96L92 541 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 CISHQ9NSE2 258 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 DERAQ9Y315 318 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 HYOU1Q9Y4L1 999 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 HES2Q9Y543 173 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 TRPV2Q9Y5S1 764 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 UNGP13051 313 aaPredicted RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 TCP1P17987 556 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 CD58P19256 250 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 RHOT2Q8IXI1 618 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 OSBPL9Q96SU4 736 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 NXF3Q9H4D5 531 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
TMCO1-202ENST00000392129 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
TMCO1-202ENST00000392129 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 ZNF185O15231 689 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CABYRO75952 493 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CYP1A1P04798 512 aaPredicted RBP13.1□□□□□ -0.31
TMCO1-202ENST00000392129 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
TMCO1-202ENST00000392129 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
TMCO1-202ENST00000392129 RBP5P82980 135 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 ZBTB6Q15916 424 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 SCARA5Q6ZMJ2 495 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
TMCO1-202ENST00000392129 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms