RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FTCDO95954 541 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF132P52740 706 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 GPC5P78333 572 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 TEX35Q5T0J7 233 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 TAF2Q6P1X5 1199 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 SLC27A1Q6PCB7 646 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 TMEM270Q6UE05 265 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 GPR161Q8N6U8 529 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ARHGEF26Q96DR7 871 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 SIX4Q9UIU6 781 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 C2CD2Q9Y426 696 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRIP11Q15643 1979 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 PDCD11Q14690 1871 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF185O15231 689 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ADAMTS4O75173 837 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CLSTN1O94985 981 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 PGK1P00558 417 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CRYBB1P53674 252 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRIM32Q13049 653 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 SNX17Q15036 470 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CLEC16AQ2KHT3 1053 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 ACAD10Q6JQN1 1059 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 C1orf127Q8N9H9 656 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 COG1Q8WTW3 980 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CAPZA3Q96KX2 299 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 CCDC94Q9BW85 323 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 PLEKHA5Q9HAU0 1116 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 RNF186Q9NXI6 227 aa12.26□□□□□ -0.45
SMARCAL1-203ENST00000392128 NPTXRO95502 500 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 UNGP13051 313 aaPredicted RBP12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 ASPAP45381 313 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 TMEM132DQ14C87 1099 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRIM72Q6ZMU5 477 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 VRTNQ9H8Y1 702 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 RNF14Q9UBS8 474 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 GTF2IRD1Q9UHL9 959 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 CES2O00748 559 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 MTA2O94776 668 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 GNA15P30679 374 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 ATICP31939 592 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 APLP1P51693 650 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 ITIH3Q06033 890 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 CXCL17Q6UXB2 119 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 CAGE1Q8TC20 777 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 TMEM40Q8WWA1 233 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 ABCB6Q9NP58 842 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 SRRDQ9UH36 339 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 STXBP5LQ9Y2K9 1186 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 DERAQ9Y315 318 aa12.25□□□□□ -0.45
SMARCAL1-203ENST00000392128 THSD7BQ9C0I4 1608 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 KIF4AO95239 1232 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 CYP1A1P04798 512 aaPredicted RBP12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 CYP1A2P05177 515 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 CST5P28325 142 aaPredicted RBP12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 HOXD10P28358 340 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 RPS6KA1Q15418 735 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 NBPF20Q3BBV1 942 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 PEX26Q7Z412 305 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 NT5DC3Q86UY8 548 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 XPNPEP3Q9NQH7 507 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 ITGA11Q9UKX5 1188 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 COG5Q9UP83 839 aa12.24□□□□□ -0.45
SMARCAL1-203ENST00000392128 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CALCAP01258 141 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 ITGB3P05106 788 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 KRT19P08727 400 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CCND3P30281 292 aaPredicted RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CXCR5P32302 372 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CENPCQ03188 943 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 SESTD1Q86VW0 696 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 SNX27Q96L92 541 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 PSMB7Q99436 277 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CTTNBP2NLQ9P2B4 639 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 HMGCRP04035 888 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 ELNP15502 786 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 MAP3K21Q5TCX8 1036 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 C11orf63Q6NUN7 778 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms