RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 BFARQ9NZS9 450 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 ARHGEF37A1IGU5 675 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 BCAR1P56945 870 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 CDKL3Q8IVW4 592 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 EIF1ADQ8N9N8 165 aaKnown RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 HPS3Q969F9 1004 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 RHBDL2Q9NX52 303 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 NAGPAQ9UK23 515 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 BLOC1S6Q9UL45 172 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 TULP2O00295 520 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 PPP6R3Q5H9R7 873 aaPredicted RBP20.71■□□□□ 0.91
SHANK1-203ENST00000391813 AKT3Q9Y243 479 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
SHANK1-203ENST00000391813 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 KRT8P05787 483 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 ZNF667Q5HYK9 610 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 RMDN3Q96TC7 470 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 INO80BQ9C086 356 aaPredicted RBP20.71■□□□□ 0.91
SHANK1-203ENST00000391813 DDX28Q9NUL7 540 aaKnown RBP20.71■□□□□ 0.91
SHANK1-203ENST00000391813 HEY1Q9Y5J3 304 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 DUSP10Q9Y6W6 482 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 MROH2AA6NES4 1674 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 MYMKA6NI61 221 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 CAND2O75155 1236 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 ZNF189O75820 626 aaPredicted RBP20.71■□□□□ 0.91
SHANK1-203ENST00000391813 EYA4O95677 639 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 GNA15P30679 374 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 FMO5P49326 533 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 JAK3P52333 1124 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 NPEPPSP55786 919 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 PDXDC2PQ6P474 469 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 GID8Q9NWU2 228 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 BCL9O00512 1426 aa20.71■□□□□ 0.91
SHANK1-203ENST00000391813 KLK7P49862 253 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ITGA8P53708 1063 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ZNF200P98182 395 aaPredicted RBP20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ACAD9Q9H845 621 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 HAO1Q9UJM8 370 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 KIF1AQ12756 1690 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 NMT2O60551 498 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 SCARF1Q14162 830 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ANKMY2Q8IV38 441 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 PASD1Q8IV76 773 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 MAP3K14Q99558 947 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 MKNK1Q9BUB5 465 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 UBE4BO95155 1302 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 SORBS3O60504 671 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 CD44P16070 742 aaKnown RBP20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ERFP50548 548 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 GRIN1Q05586 938 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 LBHD1Q9BQE6 289 aaPredicted RBP20.7■□□□□ 0.9
SHANK1-203ENST00000391813 TMEM260Q9NX78 707 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 GLI1P08151 1106 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 COMTP21964 271 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 PTPN4P29074 926 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ATICP31939 592 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 KLHDC7AQ5VTJ3 777 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 LRRC8BQ6P9F7 803 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 ARHGAP22Q7Z5H3 698 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 SLC44A5Q8NCS7 719 aa20.7■□□□□ 0.9
SHANK1-203ENST00000391813 HEXIM2Q96MH2 286 aaKnown RBP20.7■□□□□ 0.9
SHANK1-203ENST00000391813 STAT3P40763 770 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 LRRC8EQ6NSJ5 796 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 MTRQ99707 1265 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 SALL3Q9BXA9 1300 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 A0A087X0T9 212 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 FAM196BA6NMK8 535 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 PLEKP08567 350 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 FAM228BP0C875 321 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 MFSD14CQ5VZR4 134 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 DDHD1Q8NEL9 900 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 LRRC4Q9HBW1 653 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 TBC1D22BQ9NU19 505 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 KLHL8Q9P2G9 620 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 OATP04181 439 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 SNRPAP09012 282 aaKnown RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 MYLK4Q86YV6 388 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 CDO1Q16878 200 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 ANGEL2Q5VTE6 544 aaKnown RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 HEATR6Q6AI08 1181 aaKnown RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 MTHFD1LQ6UB35 978 aa20.69■□□□□ 0.9
SHANK1-203ENST00000391813 SLC13A5Q86YT5 568 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 RBBP8NLQ8NC74 664 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-203ENST00000391813 FKBP6O75344 327 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 SLC9A1P19634 815 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 CALB2P22676 271 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 SNAPC2Q13487 334 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 ATXN2LQ8WWM7 1075 aaKnown RBP20.68■□□□□ 0.9
SHANK1-203ENST00000391813 MYOZ2Q9NPC6 264 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 DTNAQ9Y4J8 743 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 YWHAHQ04917 246 aaPredicted RBP20.68■□□□□ 0.9
SHANK1-203ENST00000391813 CYP26A1O43174 497 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 USP17L6PQ6QN14 398 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 EEPD1Q7L9B9 569 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 B4GALNT2Q8NHY0 566 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms