RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 AGAP11Q8TF27 550 aa12.77□□□□□ -0.37
USP5-202ENST00000389231 ATP6V0A1Q93050 837 aa12.77□□□□□ -0.37
USP5-202ENST00000389231 PWWP2AQ96N64 755 aa12.77□□□□□ -0.37
USP5-202ENST00000389231 MLXIPLQ9NP71 852 aa12.77□□□□□ -0.37
USP5-202ENST00000389231 KCNK9Q9NPC2 374 aa12.77□□□□□ -0.37
USP5-202ENST00000389231 DGAT1O75907 488 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 GAS8O95995 478 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CFHP08603 1231 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 RALAP11233 206 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CCND2P30279 289 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 MAN1A1P33908 653 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 VPS41P49754 854 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 NCALDP61601 193 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 SP4Q02446 784 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 ENPEPQ07075 957 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CXCL9Q07325 125 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 NUGGCQ68CJ6 796 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 ANKRD42Q8N9B4 389 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 TEPSINQ96N21 525 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CTNNAL1Q9UBT7 734 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 ANAPC5Q9UJX4 755 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 FOXO6A8MYZ6 492 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP5-202ENST00000389231 EXTL3O43909 919 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 RGS20O76081 388 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 SUN1O94901 812 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 PROSCO94903 275 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 HLA-DRAP01903 254 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 C4BPAP04003 597 aaKnown RBP12.76□□□□□ -0.37
USP5-202ENST00000389231 ATF2P15336 505 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 KCNA2P16389 499 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 TNNI1P19237 187 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 BPIFB4P59827 614 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CLDN10P78369 228 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 CENPCQ03188 943 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 KLF1Q13351 362 aaPredicted RBP12.76□□□□□ -0.37
USP5-202ENST00000389231 ZNF268Q14587 947 aaPredicted RBP12.76□□□□□ -0.37
USP5-202ENST00000389231 ZACNQ401N2 412 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 XRRA1Q6P2D8 792 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 VSTM1Q6UX27 236 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 MON1BQ7L1V2 547 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP5-202ENST00000389231 KLHL29Q96CT2 875 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 TRIM11Q96F44 468 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 TRAIPQ9BWF2 469 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 NEU2Q9Y3R4 380 aa12.76□□□□□ -0.37
USP5-202ENST00000389231 MAFGO15525 162 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 PAX7P23759 505 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 DSG3P32926 999 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 ALDH5A1P51649 535 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 RTP1P59025 263 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 KIF2BQ8N4N8 673 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 CCHCR1Q8TD31 782 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 FAM118BQ9BPY3 351 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 CYP26B1Q9NR63 512 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 PSAPP07602 524 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 ACOT2P49753 483 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 LIG4P49917 911 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 TAS2R40P59535 323 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 CAV1Q03135 178 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 PTP4A2Q12974 167 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 PSMD6Q15008 389 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 CCDC60Q8IWA6 550 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 C15orf41Q9Y2V0 281 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 HGSO14964 777 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 THAP12O43422 761 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 SORBS3O60504 671 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 DKC1O60832 514 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP5-202ENST00000389231 VNN1O95497 513 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 NLRP11P59045 1033 aaKnown RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 MAMLD1Q13495 774 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 MPP2Q14168 576 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 CCNG2Q16589 344 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 PASD1Q8IV76 773 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 PRCCQ92733 491 aaPredicted RBP12.75□□□□□ -0.37
USP5-202ENST00000389231 C11orf70Q9BRQ4 267 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 KIAA1586Q9HCI6 787 aa12.75□□□□□ -0.37
USP5-202ENST00000389231 NINJ2Q9NZG7 142 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms