RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SMIM22K7EJ46 135 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PPP6CO00743 305 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 KIAA0391O15091 583 aaKnown RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PRAMEF10O60809 474 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ASMTLO95671 621 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 TTLL1O95922 423 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 FAM163BP0C2L3 166 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SRGNP10124 158 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NR2F6P10588 404 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 FPR1P21462 350 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CERS1P27544 350 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ECHS1P30084 290 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NR4A2P43354 598 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CCT8P50990 548 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ZNF134P52741 427 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 IL2P60568 153 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 RPS7P62081 194 aaKnown RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PHC1P78364 1004 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 OCRLQ01968 901 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 DSG1Q02413 1049 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CREMQ03060 361 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 RBL2Q08999 1139 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PABPC4Q13310 644 aaKnown RBP eCLIP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SP140Q13342 867 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SERINC3Q13530 473 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 RAPGEF1Q13905 1077 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PTPRRQ15256 657 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 RABEP1Q15276 862 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 LRRC41Q15345 812 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PCBP1Q15365 356 aaKnown RBP eCLIP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 TERF2Q15554 542 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 UGT8Q16880 541 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 MST1LQ2TV78 715 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NBPF8Q3BBV2 869 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 KRTAP27-1Q3LI81 207 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PREPLQ4J6C6 727 aaPredicted RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NAALADL2Q58DX5 795 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CEP78Q5JTW2 689 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ZNF66Q6ZN08 573 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CLNKQ7Z7G1 428 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NEK8Q86SG6 692 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 C11orf74Q86VG3 221 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 KIF18BQ86Y91 864 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ZDHHC17Q8IUH5 632 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 FITM2Q8N6M3 262 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 Q8NA96 180 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ZBTB8BQ8NAP8 495 aaPredicted RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 B3GALNT2Q8NCR0 500 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SMRP1Q8NCR6 262 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SMC1BQ8NDV3 1235 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NSUN7Q8NE18 718 aaKnown RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PMFBP1Q8TBY8 1022 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 MYCBPAPQ8TBZ2 947 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CCHCR1Q8TD31 782 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 FBXO41Q8TF61 875 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 NUP133Q8WUM0 1156 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PAWRQ96IZ0 340 aaKnown RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 PGBD1Q96JS3 809 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 MED15Q96RN5 788 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 CAMKK2Q96RR4 588 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 FEZ1Q99689 392 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ORAI3Q9BRQ5 295 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 WNT8AQ9H1J5 351 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 BCO1Q9HAY6 547 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 LANCL2Q9NS86 450 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 TMEM140Q9NV12 185 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 INTS13Q9NVM9 706 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 MTMR4Q9NYA4 1195 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SH3BP4Q9P0V3 963 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 MAGEC2Q9UBF1 373 aaPredicted RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SLC23A1Q9UHI7 598 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 AJAP1Q9UKB5 411 aaPredicted RBP0.84□□□□□ -2.27
SNORD28-201ENST00000384706 ACTL7AQ9Y615 435 aa0.84□□□□□ -2.27
SNORD28-201ENST00000384706 SMIM35A0A1B0GVV1 85 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 A0A1W2PS29 197 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 VWC2LB2RUY7 222 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PRRT4C9JH25 899 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PRR23D1E9PI22 279 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 F5H697 171 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 GCOM1H8Y6P7 765 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TOR1BO14657 336 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TEX33O43247 280 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PROM1O43490 865 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 URI1O94763 535 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FKBP9O95302 570 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 LATS1O95835 1130 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TOP3BO95985 862 aaKnown RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 TUBB4AP04350 444 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 RHOP08100 348 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 EBLN1P0CF75 366 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 NHLRC4P0CG21 123 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PRR23D2P0DMB1 279 aaPredicted RBP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 FCER1AP12319 257 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 ALAS1P13196 640 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PPP3CBP16298 524 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 KCNA2P16389 499 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 NDUFB7P17568 137 aa0.83□□□□□ -2.28
SNORD28-201ENST00000384706 SFPQP23246 707 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORD28-201ENST00000384706 PCSK1P29120 753 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms