RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 CYFIP1Q7L576 1253 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 GALNT8Q9NY28 637 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.86□□□□□ -0.35
SHOX-203ENST00000381578 MYH6P13533 1939 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
SHOX-203ENST00000381578 LOC100653049A0A140TA62 436 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 TISP43B9A030 160 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 SORBS3O60504 671 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 LPXNO60711 386 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 KRT34O76011 436 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 VCAM1P19320 739 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 BBOF1Q8ND07 529 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 ASAP3Q8TDY4 903 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
SHOX-203ENST00000381578 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHOX-203ENST00000381578 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 GTF2IP78347 998 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ASPHQ12797 758 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 WASHC2DQ5SRD0 308 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 LLGL2Q6P1M3 1020 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 CENPUQ71F23 418 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 KCTD10Q9H3F6 313 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 RGL2O15211 777 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 PSMG1O95456 288 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 MYL2P10916 166 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 TNNI1P19237 187 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 RRM1P23921 792 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 PHBP35232 272 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 MFAP3P55082 362 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 NME8Q8N427 588 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 HAS1Q92839 578 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 RBM41Q96IZ5 413 aaKnown RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 FAM84AQ96KN4 292 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ZNF184Q99676 751 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 C10orf88Q9H8K7 445 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ARL8BQ9NVJ2 186 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ATRNO75882 1429 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 MEI4A8MW99 385 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 CFLARO15519 480 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 MAP3K13O43283 966 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 GSTA2P09210 222 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 CACNB3P54284 484 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 NPEPPSP55786 919 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 OGFOD1Q8N543 542 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 CFAP36Q96G28 342 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 DNAJC1Q96KC8 554 aaKnown RBP12.85□□□□□ -0.35
SHOX-203ENST00000381578 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 LRMDAQ9H2I8 198 aa12.85□□□□□ -0.35
SHOX-203ENST00000381578 GJB6O95452 261 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ETS1P14921 441 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ACBD5Q5T8D3 534 aaPredicted RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 NEDD1Q8NHV4 660 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 NT5C1BQ96P26 610 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 TJP3O95049 919 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 MAN1A1P33908 653 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 PRKCIP41743 596 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 VAMP7P51809 220 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 WDR4P57081 412 aaKnown RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 DSG1Q02413 1049 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 MGAT5Q09328 741 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 SLC1A5Q15758 541 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 OTOAQ7RTW8 1153 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ARHGEF19Q8IW93 802 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 PYDC1Q8WXC3 89 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 ART4Q93070 314 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 NAP1L4Q99733 375 aaKnown RBP12.84□□□□□ -0.35
SHOX-203ENST00000381578 BTBD10Q9BSF8 475 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 TMEM120AQ9BXJ8 343 aa12.84□□□□□ -0.35
SHOX-203ENST00000381578 MANSC1Q9H8J5 431 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms