RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
RPAIN-202ENST00000381208 MCM4P33991 863 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 NBL1P41271 181 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 ZNF131P52739 623 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 ROR1Q01973 937 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 CUL4AQ13619 759 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 ARSHQ5FYA8 562 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 TCEAL8Q8IYN2 117 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 CCSER1Q9C0I3 900 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 ARHGEF3Q9NR81 526 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 TBX20Q9UMR3 447 aa14.15□□□□□ -0.14
RPAIN-202ENST00000381208 MRPS23Q9Y3D9 190 aaKnown RBP14.15□□□□□ -0.14
RPAIN-202ENST00000381208 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
RPAIN-202ENST00000381208 TTC26A0AVF1 554 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 I3L4J1 428 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 ZNF197O14709 1029 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 OGTO15294 1046 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 TRAK2O60296 914 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 TBCAO75347 108 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 MICAL2O94851 1124 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 PTPN2P17706 415 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 LRPAP1P30533 357 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 CTXN3Q4LDR2 81 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 ELMOD1Q8N336 334 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 DTWD2Q8NBA8 298 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 LEMD2Q8NC56 503 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 GPR152Q8TDT2 470 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 LARP4BQ92615 738 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 RAD54LQ92698 747 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 PHOX2BQ99453 314 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 REEP2Q9BRK0 252 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 RPF1Q9H9Y2 349 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 TBC1D17Q9HA65 648 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 DNMT3BQ9UBC3 853 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 CITO14578 2027 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
RPAIN-202ENST00000381208 ZFHX2Q9C0A1 2572 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-202ENST00000381208 TRIP11Q15643 1979 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 WDR27A2RRH5 827 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 KRBA1A5PL33 1030 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 K7ENM7 598 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 RHOP08100 348 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 CXCL8P10145 99 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 PLCG1P19174 1290 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 DDIT3P35638 169 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 TXLNAP40222 546 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 NTHL1P78549 312 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 POU5F1Q01860 360 aaKnown RBP14.13□□□□□ -0.15
RPAIN-202ENST00000381208 PRKCQQ04759 706 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 IQCEQ6IPM2 695 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 NPAS3Q8IXF0 933 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
RPAIN-202ENST00000381208 C18orf25Q96B23 403 aaPredicted RBP14.13□□□□□ -0.15
RPAIN-202ENST00000381208 CYP4F11Q9HBI6 524 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 BLOC1S4Q9NUP1 217 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 CA14Q9ULX7 337 aa14.13□□□□□ -0.15
RPAIN-202ENST00000381208 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 NPHP3-ACAD11A0A0J9YXS1 232 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-202ENST00000381208 M0QZQ0 153 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 OAZ2O95190 189 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 ADRB2P07550 413 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 IGFBP6P24592 240 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-202ENST00000381208 STARD6P59095 220 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 GTF2BQ00403 316 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 YWHAHQ04917 246 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-202ENST00000381208 ZBTB6Q15916 424 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 CYP4A22Q5TCH4 519 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 SLFN12LQ6IEE8 588 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 PARM1Q6UWI2 310 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 USP37Q86T82 979 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 MAP4K3Q8IVH8 894 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 BEST2Q8NFU1 509 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 ITFG1Q8TB96 612 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 DDX12PQ92771 950 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 FGF14Q92915 247 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 SEMA4AQ9H3S1 761 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 ST6GALNAC4Q9H4F1 302 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 DERAQ9Y315 318 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 SIT1Q9Y3P8 196 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 MYH11P35749 1972 aa14.12□□□□□ -0.15
RPAIN-202ENST00000381208 A0A0B4J269 797 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 PI15O43692 258 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 ECI2O75521 394 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
RPAIN-202ENST00000381208 ARPP19P56211 112 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 PLD1Q13393 1074 aa14.11□□□□□ -0.15
RPAIN-202ENST00000381208 DHX8Q14562 1220 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms