RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 CXCL8P10145 99 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 RALAP11233 206 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 GBP1P32455 592 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 MAN1A1P33908 653 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ZNF131P52739 623 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 TMED2Q15363 201 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 CROCCP2Q86T23 111 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 NME8Q8N427 588 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 NIF3L1Q9GZT8 377 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 FAM49BQ9NUQ9 324 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 PPP2R3BQ9Y5P8 575 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 DHX15O43143 795 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 CELF2O95319 508 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 GZMAP12544 262 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 KCNA3P22001 575 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 YWHAGP61981 247 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDX2-201ENST00000381020 MAPK7Q13164 816 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 HHATQ5VTY9 493 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 SLC13A5Q86YT5 568 aaPredicted RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 MAP7D3Q8IWC1 876 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 SAYSD1Q9NPB0 183 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 PHF2O75151 1096 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 ERVK-9P63128 1117 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 FBXO25Q8TCJ0 367 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 ATP6V1G3Q96LB4 118 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 C9orf72Q96LT7 481 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 TEPSINQ96N21 525 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 OSBPL8Q9BZF1 889 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 RRP15Q9Y3B9 282 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 FAM187AA6NFU0 413 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 SPATA31C2B4DYI2 1134 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 MCF2LO15068 1137 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 ADCY3O60266 1144 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 KRT10P13645 584 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 KCNA2P16389 499 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 CDH8P55286 799 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 TNFAIP2Q03169 654 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 LMNB2Q03252 620 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 PPATQ06203 517 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 GPS1Q13098 491 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 AMHR2Q16671 573 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 GDAP1Q8TB36 358 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
CDX2-201ENST00000381020 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
CDX2-201ENST00000381020 A6NJR5 290 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 F5H423 210 aaPredicted RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 PYGMP11217 842 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 ADORA2BP29275 332 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 HUNKP57058 714 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 DHX34Q14147 1143 aaKnown RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 TAF1CQ15572 869 aaPredicted RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 GKAP1Q5VSY0 366 aaPredicted RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 ZC3H18Q86VM9 953 aaKnown RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 TSEN2Q8NCE0 465 aaKnown RBP13.27□□□□□ -0.28
CDX2-201ENST00000381020 OR5B17Q8NGF7 314 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 PORCNQ9H237 461 aa13.27□□□□□ -0.28
CDX2-201ENST00000381020 HSD17B3P37058 310 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 CEP120Q8N960 986 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 ACTRT1Q8TDG2 376 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
CDX2-201ENST00000381020 PDGFCQ9NRA1 345 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 EXOC1LA0A1B0GW35 172 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 A8MXQ7 604 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 TGFB3P10600 412 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 TNFSF9P41273 254 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 LRRC14Q15048 493 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 BBOF1Q8ND07 529 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 KREMEN1Q96MU8 473 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.29
CDX2-201ENST00000381020 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.29
CDX2-201ENST00000381020 MYH10P35580 1976 aa13.26□□□□□ -0.29
CDX2-201ENST00000381020 CXCL11O14625 94 aa13.26□□□□□ -0.29
CDX2-201ENST00000381020 CTSHP09668 335 aa13.26□□□□□ -0.29
CDX2-201ENST00000381020 MYBL1P10243 752 aa13.26□□□□□ -0.29
CDX2-201ENST00000381020 TMEM132DQ14C87 1099 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms