RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
SMN1-202ENST00000380707 ZNF18P17022 549 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
SMN1-202ENST00000380707 AP3M2P53677 418 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 ZACNQ401N2 412 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 SLC39A11Q8N1S5 342 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 IGSF21Q96ID5 467 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 AGAP1Q9UPQ3 857 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
SMN1-202ENST00000380707 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 FGF18O76093 207 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 VNN1O95497 513 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 KRT19P08727 400 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
SMN1-202ENST00000380707 GTF2H1P32780 548 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
SMN1-202ENST00000380707 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 BIRC3Q13489 604 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 CBWD6Q4V339 395 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 CBWD3Q5JTY5 395 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 HABP4Q5JVS0 413 aaKnown RBP13.66□□□□□ -0.22
SMN1-202ENST00000380707 CBWD5Q5RIA9 395 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
SMN1-202ENST00000380707 ADAM28Q9UKQ2 775 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMN1-202ENST00000380707 NLRC5Q86WI3 1866 aa13.66□□□□□ -0.22
SMN1-202ENST00000380707 EPOPA6NHQ4 379 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 TMEM189-UBE2V1I3L0A0 370 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 SPTLC1O15269 473 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 STX10O60499 249 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 TADA2AO75478 443 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 PPM1AP35813 382 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 LILRA4P59901 499 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 RBP5P82980 135 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 KRT39Q6A163 491 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 TAS1R2Q8TE23 839 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 SAMD11Q96NU1 681 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
SMN1-202ENST00000380707 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
SMN1-202ENST00000380707 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
SMN1-202ENST00000380707 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 I3L4J1 428 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 LRRN2O75325 713 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 EFEMP2O95967 443 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 AFPP02771 609 aaKnown RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 RB1P06400 928 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 BRCC3P46736 316 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 FMO5P49326 533 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 MXI1P50539 228 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 MYL6P60660 151 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 NCOA4Q13772 614 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 KRT31Q15323 416 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 SCN1AP35498 2009 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 H3BNC9 293 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 DNAJB1P25685 340 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMN1-202ENST00000380707 TRPC3Q13507 836 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 MAN2A1Q16706 1144 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 VWA3BQ502W6 1294 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 FUT10Q6P4F1 479 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
SMN1-202ENST00000380707 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 HPDLQ96IR7 371 aa13.64□□□□□ -0.23
SMN1-202ENST00000380707 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms