RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 CALRP27797 417 aaKnown RBP18.8■□□□□ 0.6
UBL3-201ENST00000380680 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
UBL3-201ENST00000380680 PPM1NQ8N819 430 aa18.8■□□□□ 0.6
UBL3-201ENST00000380680 ABT1Q9ULW3 272 aaKnown RBP18.8■□□□□ 0.6
UBL3-201ENST00000380680 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
UBL3-201ENST00000380680 A0A1B0GUA9 196 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 SEC24CP53992 1094 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 EIF3EP60228 445 aaKnown RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 SYCP2LQ5T4T6 812 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 LRIG3Q6UXM1 1119 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 GPRC5AQ8NFJ5 357 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 PARD3BQ8TEW8 1205 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ATG4AQ8WYN0 398 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ACTR5Q9H9F9 607 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 WDR35Q9P2L0 1181 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 COL14A1Q05707 1796 aaKnown RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 ASTN1O14525 1302 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 A0A0A6YYK5 440 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 CREB3O43889 395 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 MAGEA9P43362 315 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 RCN2Q14257 317 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 PIGHQ14442 188 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 SNCBQ16143 134 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 CYP4A22Q5TCH4 519 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 ANKMY2Q8IV38 441 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 CCT6BQ92526 530 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 CCT8L2Q96SF2 557 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 KCTD10Q9H3F6 313 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 MAPTP10636 758 aaKnown RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 NLRP11P59045 1033 aaKnown RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 DGKZQ13574 1117 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 E2F5Q15329 346 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 SPEF2Q9C093 1822 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ROR1Q01973 937 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 SH3BP5LQ7L8J4 393 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 AFAP1L2Q8N4X5 818 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 KAT5Q92993 513 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ACSF2Q96CM8 615 aaPredicted RBP18.79■□□□□ 0.6
UBL3-201ENST00000380680 SPATC1LQ9H0A9 340 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 IKZF4Q9H2S9 585 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
UBL3-201ENST00000380680 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 PDGFRBP09619 1106 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 LSP1P33241 339 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 MMP14P50281 582 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 PPP3CAQ08209 521 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 HIF1AQ16665 826 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 NXNQ6DKJ4 435 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 ZNF449Q6P9G9 518 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 FBXO25Q8TCJ0 367 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 ATP8B4Q8TF62 1192 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 CSDE1O75534 798 aaKnown RBP18.78■□□□□ 0.6
UBL3-201ENST00000380680 RWDD4Q6NW29 188 aaKnown RBP18.78■□□□□ 0.6
UBL3-201ENST00000380680 VSIG10LQ86VR7 867 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 RNF139Q8WU17 664 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 KLHL8Q9P2G9 620 aaPredicted RBP18.78■□□□□ 0.6
UBL3-201ENST00000380680 MYH2Q9UKX2 1941 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 PTPRAP18433 802 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 DLG4P78352 724 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 NR1H3Q13133 447 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 CCL15Q16663 113 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 TSNAXIP1Q2TAA8 658 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 ATP11CQ8NB49 1132 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 PSD3Q9NYI0 1048 aa18.78■□□□□ 0.6
UBL3-201ENST00000380680 COL1A1P02452 1464 aaPredicted RBP18.78■□□□□ 0.6
UBL3-201ENST00000380680 SPAG7O75391 227 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ITGB3P05106 788 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 RARBP10826 455 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 LCP1P13796 627 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 CLNS1AP54105 237 aaKnown RBP18.77■□□□□ 0.6
UBL3-201ENST00000380680 SYDE1Q6ZW31 735 aaPredicted RBP18.77■□□□□ 0.6
UBL3-201ENST00000380680 TRMT10CQ7L0Y3 403 aaKnown RBP18.77■□□□□ 0.6
UBL3-201ENST00000380680 DEPDC1BQ8WUY9 529 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 DNAJC18Q9H819 358 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 CST8O60676 142 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ATP9AO75110 1047 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ORC1Q13415 861 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 KYAT1Q16773 422 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 HYIQ5T013 277 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 TRIM42Q8IWZ5 723 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 STAP1Q9ULZ2 295 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ANKRD63C9JTQ0 380 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 ZC3H11AO75152 810 aaKnown RBP eCLIP18.77■□□□□ 0.6
UBL3-201ENST00000380680 MYCP01106 439 aaPredicted RBP18.77■□□□□ 0.6
UBL3-201ENST00000380680 ITGA8P53708 1063 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 HEATR6Q6AI08 1181 aaKnown RBP18.77■□□□□ 0.6
UBL3-201ENST00000380680 EPN3Q9H201 632 aa18.77■□□□□ 0.6
UBL3-201ENST00000380680 COPEO14579 308 aa18.77■□□□□ 0.59
UBL3-201ENST00000380680 AGTP01019 485 aa18.77■□□□□ 0.59
UBL3-201ENST00000380680 SESN3P58005 492 aa18.77■□□□□ 0.59
UBL3-201ENST00000380680 STAT4Q14765 748 aa18.77■□□□□ 0.59
UBL3-201ENST00000380680 SLC35G1Q2M3R5 365 aa18.77■□□□□ 0.59
UBL3-201ENST00000380680 COBLL1Q53SF7 1204 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms