RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PCP4L1A6NKN8 68 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 STXBP3O00186 592 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 CYP26A1O43174 497 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 KLC1Q07866 573 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 MAPRE2Q15555 327 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 ANKS1AQ92625 1134 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 EXT2Q93063 718 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 RANBP17Q9H2T7 1088 aaKnown RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 RAD21L1Q9H4I0 556 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 TBC1D23Q9NUY8 699 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SMAPO00193 183 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 KIAA0391O15091 583 aaKnown RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 FANCGO15287 622 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 MARK3P27448 753 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SLC9A5Q14940 896 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 CREG2Q8IUH2 290 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 RCOR2Q8IZ40 523 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 TIPINQ9BVW5 301 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 FSD1LQ9BXM9 530 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 C6orf203Q9P0P8 240 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 GLI1P08151 1106 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 PHKA2P46019 1235 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 DNAL1Q4LDG9 190 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 RASSF3Q86WH2 238 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 TSEN2Q8NCE0 465 aaKnown RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 TRIM39Q9HCM9 518 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 REXO2Q9Y3B8 237 aaKnown RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 ZBTB24O43167 697 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-203ENST00000378391 KLRC1P26715 233 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 CIITAP33076 1130 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
PRDM16-203ENST00000378391 SYCE1LA8MT33 242 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 M0QYV0 167 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 HSD17B3P37058 310 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 FMO5P49326 533 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 CACNB3P54284 484 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 ITPRIPL1Q6GPH6 555 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 UBXN6Q9BZV1 441 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 RBAKQ9NYW8 714 aaPredicted RBP15.24■□□□□ 0.03
PRDM16-203ENST00000378391 MYMKA6NI61 221 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 NMT1P30419 496 aaKnown RBP15.24■□□□□ 0.03
PRDM16-203ENST00000378391 DAB2P98082 770 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 MEA1Q16626 185 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 FIGNQ5HY92 759 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 JAMLQ86YT9 394 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 TRAF3IP3Q9Y228 551 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 INPP5FQ9Y2H2 1132 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 CCT8L1PA6NM43 557 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 TBX3O15119 743 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 TTMPQ5BVD1 217 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 MRPS26Q9BYN8 205 aaKnown RBP15.24■□□□□ 0.03
PRDM16-203ENST00000378391 GABBR1Q9UBS5 961 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 PEX14O75381 377 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 CDH6P55285 790 aa15.24■□□□□ 0.03
PRDM16-203ENST00000378391 AGO2Q9UKV8 859 aaKnown RBP15.24■□□□□ 0.03
PRDM16-203ENST00000378391 PIK3R2O00459 728 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 TMEM253P0C7T8 217 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 RAB14P61106 215 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 DUOXA2Q1HG44 320 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 TMC5Q6UXY8 1006 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 HUS1O60921 280 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 ATP6V1E1P36543 226 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 CYLC2Q14093 348 aaPredicted RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 FAM102AQ5T9C2 384 aaPredicted RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 NCLNQ969V3 563 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 MASTLQ96GX5 879 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 TSSK1BQ9BXA7 367 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 MRPL4Q9BYD3 311 aaKnown RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 ETAA1Q9NY74 926 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 RCCD1A6NED2 376 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 MED21Q13503 144 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 FDX1P10109 184 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 EIF3EP60228 445 aaKnown RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 LONRF1Q17RB8 773 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 PSMC3IPQ9P2W1 217 aaPredicted RBP15.23■□□□□ 0.03
PRDM16-203ENST00000378391 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
PRDM16-203ENST00000378391 ZSCAN5CA6NGD5 496 aaPredicted RBP15.22■□□□□ 0.03
PRDM16-203ENST00000378391 SNX2O60749 519 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 ACTR2P61160 394 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 POU5F1BQ06416 359 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 SWSAP1Q6NVH7 229 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 ARHGAP27Q6ZUM4 889 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 TEX9Q8N6V9 391 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 FAM129AQ9BZQ8 928 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 ZNF302Q9NR11 478 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
PRDM16-203ENST00000378391 TRIM16O95361 564 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms