RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 PER2O15055 1255 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 KRT13P13646 458 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 RPL9P32969 192 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 C9orf57Q5W0N0 161 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 C11orf57Q6ZUT1 292 aaPredicted RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 UROC1Q96N76 676 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 DERAQ9Y315 318 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 KIAA1671Q9BY89 1806 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 SPTLC1O15269 473 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 PHACTR2O75167 634 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 TNNC2P02585 160 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 CYP3A5P20815 502 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 GCLMP48507 274 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 TYRO3Q06418 890 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 BFSP1Q12934 665 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 SURF1Q15526 300 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 NFIL3Q16649 462 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 PTPROQ16827 1216 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 CD300LGQ6UXG3 332 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 INTS8Q75QN2 995 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 TMEM174Q8WUU8 243 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 MRPL38Q96DV4 380 aaKnown RBP12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
DEPDC4-202ENST00000378244 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 C5orf42Q9H799 3197 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 CXCL14O95715 111 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 LRPAP1P30533 357 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 CDR1P51861 262 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 LILRA4P59901 499 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 STX1AQ16623 288 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 ARMCX3Q9UH62 379 aaPredicted RBP12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 SIX4Q9UIU6 781 aa12.65□□□□□ -0.38
DEPDC4-202ENST00000378244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 PIRO00625 290 aa12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 PPP3CAQ08209 521 aa12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 DSTYKQ6XUX3 929 aa12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 ADGRD2Q7Z7M1 963 aa12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.39
DEPDC4-202ENST00000378244 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 TRAPPC3O43617 180 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 SOD2P04179 222 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 UBE3AQ05086 875 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 SKIV2LQ15477 1246 aaKnown RBP12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 C1orf220Q5T0J3 134 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 SV2AQ7L0J3 742 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 LZTS1Q9Y250 596 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
DEPDC4-202ENST00000378244 LRRN2O75325 713 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 URODP06132 367 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 TRPC3Q13507 836 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 USP37Q86T82 979 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 MRPL17Q9NRX2 175 aaKnown RBP12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 ANK1P16157 1881 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 CARNS1A5YM72 827 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 KPNA7A9QM74 516 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 CTSAP10619 480 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 NRIP1P48552 1158 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 GLUD2P49448 558 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 TAF6P49848 677 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 MYL6P60660 151 aa12.63□□□□□ -0.39
DEPDC4-202ENST00000378244 RBP5P82980 135 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms