RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 FAM136AQ96C01 138 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 CPB2Q96IY4 423 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 WBP4O75554 376 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 WEE2P0C1S8 567 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 CKBP12277 381 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 MYL4P12829 197 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 RESP18Q5W5W9 173 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 NCF1BA6NI72 391 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 NCF1CA8MVU1 366 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 NCF1P14598 390 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 PMS2P54278 862 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 DPYDQ12882 1025 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 FOXR1Q6PIV2 292 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 MED15Q96RN5 788 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 ANGPT2O15123 496 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 RNASEH1O60930 286 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 GUCY1A2P33402 732 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 ORC1Q13415 861 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 ST13P4Q8IZP2 240 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 FGFR4P22455 802 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 TMEM132BQ14DG7 1078 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 CDR2LQ86X02 465 aaPredicted RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 KAT2BQ92831 832 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 ZKSCAN4Q969J2 545 aaPredicted RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 BRAFP15056 766 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 ZNF438Q7Z4V0 828 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 APPL1Q9UKG1 709 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 IRAK1BP1Q5VVH5 260 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 PCDHGA4Q9Y5G9 962 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 GUCA1AP43080 201 aaPredicted RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 HORMAD1Q86X24 394 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 TEX9Q8N6V9 391 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 DIS3LQ8TF46 1054 aaKnown RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 ZFATQ9P243 1243 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 XPO7Q9UIA9 1087 aaKnown RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 PCNAP12004 261 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 TP53BP2Q13625 1128 aa14.8□□□□□ -0.04
TRIM13-202ENST00000378182 ZNF70Q9UC06 446 aaPredicted RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
TRIM13-202ENST00000378182 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 NCOA4Q13772 614 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 USP10Q14694 798 aaKnown RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 GRM4Q14833 912 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 ATF7IP2Q5U623 682 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 ARL6IP4Q66PJ3 421 aaKnown RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 NFRKBQ6P4R8 1299 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 SNF8Q96H20 258 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 TGS1Q96RS0 853 aaKnown RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 RERGLQ9H628 205 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 BARHL2Q9NY43 387 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 H0YC42 278 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 FGFR1P11362 822 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 ATP1A3P13637 1013 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 DPEP1P16444 411 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 RHOT1Q8IXI2 618 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 FBXO10Q9UK96 956 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 MAN1A2O60476 641 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CD4P01730 458 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 TCN1P20061 433 aaPredicted RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 MAGOHP61326 146 aaKnown RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CCDC137Q6PK04 289 aaKnown RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 RABGGTAQ92696 567 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 SLITRK1Q96PX8 696 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 TMEM60Q9H2L4 133 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 TASP1Q9H6P5 420 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 HPGDP15428 266 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CHI3L1P36222 383 aaPredicted RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 EFNA5P52803 228 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 GABPB1Q06547 395 aaPredicted RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 IZUMO3Q5VZ72 239 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 MRFAP1L1Q96HT8 127 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 PRR23D1E9PI22 279 aaPredicted RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 PRR23D2P0DMB1 279 aaPredicted RBP14.79□□□□□ -0.04
TRIM13-202ENST00000378182 ACTR2P61160 394 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CYGBQ8WWM9 190 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 CATSPERBQ9H7T0 1116 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 SLC38A7Q9NVC3 462 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 NDOR1Q9UHB4 597 aa14.79□□□□□ -0.04
TRIM13-202ENST00000378182 VTNP04004 478 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 ENO1P06733 434 aaKnown RBP14.78□□□□□ -0.04
TRIM13-202ENST00000378182 MRPL28Q13084 256 aaKnown RBP14.78□□□□□ -0.04
TRIM13-202ENST00000378182 INPP5DQ92835 1189 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 CENPTQ96BT3 561 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 LY9Q9HBG7 655 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 CPA4Q9UI42 421 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 SKIP12755 728 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 GYS2P54840 703 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 PI4K2AQ9BTU6 479 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 PSD3Q9NYI0 1048 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 IPPQ9Y573 584 aa14.78□□□□□ -0.04
TRIM13-202ENST00000378182 H2AFYO75367 372 aaKnown RBP14.78□□□□□ -0.04
TRIM13-202ENST00000378182 POLD3Q15054 466 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms