RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 APLP1P51693 650 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 KRT83P78385 493 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 ZC3H18Q86VM9 953 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 SFR1Q86XK3 245 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 ERO1BQ86YB8 467 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 OSCP1Q8WVF1 389 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 GLMNQ92990 594 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 FAM20AQ96MK3 541 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 TMX2Q9Y320 296 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 GAKO14976 1311 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 NFIBO00712 420 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 YY1P25490 414 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 ATICP31939 592 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 KPNA1P52294 538 aaPredicted RBP11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 CNPY1Q3B7I2 92 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 VASH1Q7L8A9 365 aaPredicted RBP11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 YTHDF3Q7Z739 585 aaKnown RBP11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 HDAC2Q92769 488 aaKnown RBP11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 ZMYND12Q9H0C1 365 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 TRIM17Q9Y577 477 aa11.46□□□□□ -0.58
PCDHGA1-201ENST00000378105 CTAGE9A4FU28 777 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 XPOTO43592 962 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 CACNA2D1P54289 1103 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 COG7P83436 770 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 NTRK3Q16288 839 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ASIC2Q16515 512 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SPOUT1Q5T280 376 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 IQCEQ6IPM2 695 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SARM1Q6SZW1 724 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 BRSK1Q8TDC3 778 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 PMEPA1Q969W9 287 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SPATA33Q96N06 139 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 MMS19Q96T76 1030 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 PDE4DIPQ5VU43 2346 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 FRMPD3Q5JV73 1810 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 GGPS1O95749 300 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ANXA13P27216 316 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ZNF658Q5TYW1 1059 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 C15orf52Q6ZUT6 534 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 CENPTQ96BT3 561 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 EIF2AK1Q9BQI3 630 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 K7ERI5 159 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 PDE5AO76074 875 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 TMEM191BP0C7N4 346 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ABCB4P21439 1286 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 QARSP47897 775 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 FKBP3Q00688 224 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 RASA2Q15283 850 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 THNSL1Q8IYQ7 743 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 MAK16Q9BXY0 300 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 TBC1D22BQ9NU19 505 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 USP20Q9Y2K6 914 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SSC5DA1L4H1 1573 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 TUBB4AP04350 444 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 ITGA2BP08514 1039 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 COPB1P53618 953 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 MSLNQ13421 630 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 TOMM20Q15388 145 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 SLC9C1Q4G0N8 1177 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 LILRB2Q8N423 598 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 NKX1-2Q9UD57 310 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
PCDHGA1-201ENST00000378105 GSTTP1A0A1W2PQM5 241 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 LIN7AO14910 233 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 SLC16A4O15374 487 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 STX10O60499 249 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 FAM107AO95990 144 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 NR1D1P20393 614 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 MAGEA1P43355 309 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 TFAMQ00059 246 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 BBS9Q3SYG4 887 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 RETREG2Q8NC44 543 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 UCKL1Q9NWZ5 548 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 ZNF541Q9H0D2 1346 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 SOWAHDA6NJG2 315 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 SPECC1L-ADORA2AF8WAN1 911 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 DYNC1LI2O43237 492 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 DNAJC6O75061 913 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 LRRN2O75325 713 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 FDX1P10109 184 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 HEPHQ9BQS7 1158 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 MAGEF1Q9HAY2 307 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 TRPC7Q9HCX4 862 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 TBKBP1A7MCY6 615 aa11.44□□□□□ -0.58
PCDHGA1-201ENST00000378105 HSF2BPO75031 334 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms