RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TNNI1P19237 187 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 FGFR3P22607 806 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 PNPLA4P41247 253 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 AARSP49588 968 aaKnown RBP eCLIP14.31□□□□□ -0.12
CKAP2-202ENST00000378034 NLRP12P59046 1061 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 PTPN14Q15678 1187 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 CT47A1Q5JQC4 288 aaPredicted RBP14.31□□□□□ -0.12
CKAP2-202ENST00000378034 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 KIAA0319Q5VV43 1072 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 KLHL10Q6JEL2 608 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 FAM186BQ8IYM0 893 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 SUSD3Q96L08 255 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 ZNF560Q96MR9 790 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
CKAP2-202ENST00000378034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.31□□□□□ -0.12
CKAP2-202ENST00000378034 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
CKAP2-202ENST00000378034 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 ARHGEF37A1IGU5 675 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
CKAP2-202ENST00000378034 IKBKBO14920 756 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 SYN3O14994 580 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 LILRB3O75022 631 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 EPB41P11171 864 aaKnown RBP14.3□□□□□ -0.12
CKAP2-202ENST00000378034 KRT13P13646 458 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 GUCY2FP51841 1108 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
CKAP2-202ENST00000378034 LILRA4P59901 499 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 RBP5P82980 135 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 TTI2Q6NXR4 508 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 MICALL1Q8N3F8 863 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 LRRC52Q8N7C0 313 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 C1orf127Q8N9H9 656 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 MTMR12Q9C0I1 747 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 TLE6Q9H808 572 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 RWDD2AQ9UIY3 292 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 CTNND2Q9UQB3 1225 aa14.3□□□□□ -0.12
CKAP2-202ENST00000378034 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
CKAP2-202ENST00000378034 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 TRIM49BA6NDI0 452 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 HIDE1A8MVS5 230 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 M0QZQ0 153 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 BRCC3P46736 316 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 TAF6P49848 677 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 KLHL40Q2TBA0 621 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 CSGALNACT2Q8N6G5 542 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 OR5B17Q8NGF7 314 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 PIK3R5Q8WYR1 880 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 RXFP1Q9HBX9 757 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 PTPRJQ12913 1337 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 CSPG5O95196 566 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 FGFR1OPO95684 399 aaKnown RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 C1RP00736 705 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 ITGB3P05106 788 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 IGFBP6P24592 240 aaPredicted RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 VAMP7P51809 220 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 COL19A1Q14993 1142 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 DUSP6Q16828 381 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 SV2CQ496J9 727 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 FILIP1Q7Z7B0 1213 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 CXorf38Q8TB03 319 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 POP1Q99575 1024 aaKnown RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
CKAP2-202ENST00000378034 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 PCDHGC5Q9Y5F6 944 aa14.29□□□□□ -0.12
CKAP2-202ENST00000378034 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 POLR2BP30876 1174 aaKnown RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 CA8P35219 290 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 HYAL1Q12794 435 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 BFSP1Q12934 665 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 MYO1EQ12965 1108 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 RTP2Q5QGT7 225 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 ANKS3Q6ZW76 656 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 PPFIBP1Q86W92 1011 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 AUTS2Q8WXX7 1259 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
CKAP2-202ENST00000378034 METTL14Q9HCE5 456 aaKnown RBP14.28□□□□□ -0.12
CKAP2-202ENST00000378034 PPEF2O14830 753 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 STX10O60499 249 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 GNA14O95837 355 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 GTF2H1P32780 548 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 NRIP1P48552 1158 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms