RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 CHMP2BQ9UQN3 213 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 GCNT3O95395 438 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 HARSP12081 509 aaKnown RBP16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 ADRA1DP25100 572 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 CAPN12Q6ZSI9 719 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 MPP4Q96JB8 637 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 NEU2Q9Y3R4 380 aa16.6■□□□□ 0.25
CSNK1A1-202ENST00000377843 PFDN1O60925 122 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 RARBP10826 455 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 KRT15P19012 456 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 MAGEA4P43358 317 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 FASTKD3Q14CZ7 662 aaKnown RBP16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 FBXO33Q7Z6M2 555 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CLPTM1LQ96KA5 538 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CCDC77Q9BR77 488 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 KCNK13Q9HB14 408 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CLIC5Q9NZA1 410 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 PPM1HQ9ULR3 514 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CRABP2P29373 138 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 PGM1P36871 562 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CFAP157Q5JU67 520 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CEP128Q6ZU80 1094 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 SHKBP1Q8TBC3 707 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 FAM161BQ96MY7 647 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 SMC6Q96SB8 1091 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CYTH2Q99418 400 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 CCDC28BQ9BUN5 200 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 ALG13Q9NP73 1137 aaKnown RBP16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
CSNK1A1-202ENST00000377843 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 ZNF862O60290 1169 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 SLC18A1P54219 525 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 P3H1Q32P28 736 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 FYB2Q5VWT5 728 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 OLFML2BQ68BL8 750 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 DUS1LQ6P1R4 473 aaKnown RBP16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 ZNF564Q8TBZ8 553 aaPredicted RBP16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 SNED1Q8TER0 1413 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 PANX3Q96QZ0 392 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 IWS1Q96ST2 819 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 TTC1Q99614 292 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 DCLK3Q9C098 648 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 GMEB1Q9Y692 573 aa16.58■□□□□ 0.25
CSNK1A1-202ENST00000377843 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 MTA1Q13330 715 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 DBN1Q16643 649 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 IZUMO3Q5VZ72 239 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 LRRC6Q86X45 466 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 ARHGEF19Q8IW93 802 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 CEP95Q96GE4 821 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.243e-8■□□□□ 10.9
CSNK1A1-202ENST00000377843 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.24
CSNK1A1-202ENST00000377843 A0A0J9YVX5 310 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 GNPATO15228 680 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 BUD23O43709 281 aaKnown RBP16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 MTA2O94776 668 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 PCNX4Q63HM2 1172 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 RIPOR1Q6ZS17 1223 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 TRIM42Q8IWZ5 723 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 ZNF398Q8TD17 642 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 KAT5Q92993 513 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 OLFM3Q96PB7 478 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 ANGPTL2Q9UKU9 493 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 PIAS1O75925 651 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 SGPL1O95470 568 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 NTSR2O95665 410 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 ESRRAP11474 423 aaPredicted RBP16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 DESP17661 470 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 RAP1GDS1P52306 607 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 HPCAP84074 193 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 CAV1Q03135 178 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 RELL1Q8IUW5 271 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 ST13P4Q8IZP2 240 aaPredicted RBP16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 EYA3Q99504 573 aa16.57■□□□□ 0.24
CSNK1A1-202ENST00000377843 PHACTR1Q9C0D0 580 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms