RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 RGS2P41220 211 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 PRELPP51888 382 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 ADARP55265 1226 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KIF22Q14807 665 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 RNF220Q5VTB9 566 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SPOPLQ6IQ16 392 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 GALNT15Q8N3T1 639 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 HSPH1Q92598 858 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KLHL11Q9NVR0 708 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 CTNNAL1Q9UBT7 734 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 MAD2L2Q9UI95 211 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SALL4Q9UJQ4 1053 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KIF20BQ96Q89 1820 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 XPO1O14980 1071 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 RTN3O95197 1032 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PYGBP11216 843 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 GZMAP12544 262 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 BMP3P12645 472 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 HMGB2P26583 209 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ZC2HC1CQ53FD0 456 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PIGWQ7Z7B1 504 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF75CPQ92670 426 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CSRNP1Q96S65 589 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CYP26B1Q9NR63 512 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 TAGLN3Q9UI15 199 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 LOC102724428A0A0B4J2F2 783 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 WEE2P0C1S8 567 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PYGMP11217 842 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 RPA1P27694 616 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PRKCIP41743 596 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 SIK1P57059 783 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ABCB5Q2M3G0 1257 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 EFHC1Q5JVL4 640 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 SYDE2Q5VT97 1194 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 IYDQ6PHW0 289 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 FITM2Q8N6M3 262 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 DNAAF3Q8N9W5 541 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 RNF169Q8NCN4 708 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CPA5Q8WXQ8 436 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CNBD2Q96M20 576 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 TTYH3Q9C0H2 523 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 NINJ2Q9NZG7 142 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ATXN10Q9UBB4 475 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 FIS1Q9Y3D6 152 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ZBBXA8MT70 800 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 FCHO1O14526 889 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.881e-7■□□□□ 8.6
CRNKL1-201ENST00000377327 KRT36O76013 467 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 GNA15P30679 374 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 HSPA13P48723 471 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PRAMEP78395 509 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 PPIDQ08752 370 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 MTM1Q13496 603 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CHI3L2Q15782 390 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 DDHD1Q8NEL9 900 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 TTC8Q8TAM2 541 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 WDR60Q8WVS4 1066 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 TLCD1Q96CP7 247 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 NR1H4Q96RI1 486 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 MTRQ99707 1265 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 DDX50Q9BQ39 737 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 ING2Q9H160 280 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 LRMDAQ9H2I8 198 aa9.53□□□□□ -0.88
CRNKL1-201ENST00000377327 RBAK-RBAKDNI3L0D1 243 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 TM9SF1O15321 606 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 SPAG6O75602 509 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 SCNN1DP51172 638 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 IL17AQ16552 155 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 LRRC55Q6ZSA7 311 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 ASCC2Q9H1I8 757 aaPredicted RBP9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 CAAP1Q9H8G2 361 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 NMRK1Q9NWW6 199 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC12A4Q9UP95 1085 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 ACTL7BQ9Y614 415 aa9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.88
CRNKL1-201ENST00000377327 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 AIM2O14862 343 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 SLC16A4O15374 487 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 P4HA2O15460 535 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 MED7O43513 233 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 UPP2O95045 317 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 MAP4P27816 1152 aaKnown RBP9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 TYK2P29597 1187 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 MCL1Q07820 350 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 DCTN2Q13561 401 aaKnown RBP9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 MARK2Q7KZI7 788 aaKnown RBP9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 MCF2L2Q86YR7 1114 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 JADE3Q92613 823 aa9.52□□□□□ -0.89
CRNKL1-201ENST00000377327 HES6Q96HZ4 224 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms