RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TXLNGYQ9BZA5 131 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 ADAM7Q9H2U9 754 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 EPB41L4BQ9H329 900 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 ASAP2O43150 1006 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 GSTA1P08263 222 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 KRT16P08779 473 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 RARAP10276 462 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.52
TRIM27-201ENST00000377194 HOOK3Q86VS8 718 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 BICD1Q96G01 975 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 CCDC113Q9H0I3 377 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
TRIM27-201ENST00000377194 CDR2Q01850 454 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 CCHCR1Q8TD31 782 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ZSWIM1Q9BR11 485 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 AZI2Q9H6S1 392 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 CFAP73A6NFT4 308 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 SNUPNO95149 360 aaKnown RBP18.26■□□□□ 0.51
TRIM27-201ENST00000377194 MMP13P45452 471 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 RTP1P59025 263 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ITIH4Q14624 930 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 CD101Q93033 1021 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 NUP85Q9BW27 656 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 HAPLN2Q9GZV7 340 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ZNFX1Q9P2E3 1918 aaKnown RBP18.26■□□□□ 0.51
TRIM27-201ENST00000377194 SUPT20HL2P0C7V6 817 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 SLCO1A2P46721 670 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 SUPT20HL1Q3ZLR7 823 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ANKRD20A2Q5SQ80 823 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ANKRD20A1Q5TYW2 823 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 ANKRD20A3Q5VUR7 823 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
TRIM27-201ENST00000377194 C18orf8Q96DM3 657 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 INTS9Q9NV88 658 aaKnown RBP18.26■□□□□ 0.51
TRIM27-201ENST00000377194 HOXC10Q9NYD6 342 aa18.26■□□□□ 0.51
TRIM27-201ENST00000377194 CORO1CQ9ULV4 474 aaPredicted RBP18.26■□□□□ 0.51
TRIM27-201ENST00000377194 MYH9P35579 1960 aaKnown RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 TCRBV7S2A1N4TA0A589 114 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 DKC1O60832 514 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 MTA2O94776 668 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PYGMP11217 842 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 GARTP22102 1010 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 ACOT2P49753 483 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PDE6CP51160 858 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 DR1Q01658 176 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 NBPF20Q3BBV1 942 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 GNPTABQ3T906 1256 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 C15orf39Q6ZRI6 1047 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 ZNF564Q8TBZ8 553 aaPredicted RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 RNF25Q96BH1 459 aaPredicted RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 ZNF653Q96CK0 615 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 ZBTB45Q96K62 511 aaPredicted RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 IFT74Q96LB3 600 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 RPS6KC1Q96S38 1066 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 CPSF2Q9P2I0 782 aaKnown RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 LTBP3Q9NS15 1303 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 LCTP09848 1927 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 MIF4GDA9UHW6 222 aaKnown RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 CYP1A2P05177 515 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 KRT5P13647 590 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 GTF2H1P32780 548 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PMS2P54278 862 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 NLRP11P59045 1033 aaKnown RBP18.25■□□□□ 0.51
TRIM27-201ENST00000377194 EMC2Q15006 297 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 CCDC38Q502W7 563 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PRELID2Q8N945 189 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 MGARPQ8TDB4 240 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 ASAP3Q8TDY4 903 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 OSBPL1AQ9BXW6 950 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 SYNGAP1Q96PV0 1343 aa18.25■□□□□ 0.51
TRIM27-201ENST00000377194 PLTPP55058 493 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 LRRC14Q15048 493 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 RBBP5Q15291 538 aaKnown RBP18.24■□□□□ 0.51
TRIM27-201ENST00000377194 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 KLHL29Q96CT2 875 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 ZDHHC18Q9NUE0 388 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
TRIM27-201ENST00000377194 PTPRJQ12913 1337 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 LIG4P49917 911 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 POLGP54098 1239 aaPredicted RBP18.24■□□□□ 0.51
TRIM27-201ENST00000377194 BLMHQ13867 455 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 LLGL1Q15334 1064 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 DUPD1Q68J44 220 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 UBL4BQ8N7F7 174 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 NAP1L3Q99457 506 aaPredicted RBP18.24■□□□□ 0.51
TRIM27-201ENST00000377194 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 RAB17Q9H0T7 212 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 PABPC3Q9H361 631 aaKnown RBP18.24■□□□□ 0.51
TRIM27-201ENST00000377194 GTF3C4Q9UKN8 822 aa18.24■□□□□ 0.51
TRIM27-201ENST00000377194 ANKRD33BA6NCL7 494 aa18.23■□□□□ 0.51
TRIM27-201ENST00000377194 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
TRIM27-201ENST00000377194 EDN1P05305 212 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms