RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 KCNK3O14649 394 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 KIF4AO95239 1232 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 NPTXRO95502 500 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ITGB3P05106 788 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 GNA15P30679 374 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ADAM17P78536 824 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CAP1Q01518 475 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 NOGQ13253 232 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF394Q53GI3 561 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CPA5Q8WXQ8 436 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ACAP3Q96P50 834 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 NIF3L1Q9GZT8 377 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ANKZF1Q9H8Y5 726 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 TMEM110-MUSTN1A8MSY1 372 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 THAP12O43422 761 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CFHP08603 1231 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-206ENST00000376724 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CLCN6P51797 869 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CDC42EP1Q00587 391 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 DEFB115Q30KQ5 88 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ACAD10Q6JQN1 1059 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CXCL17Q6UXB2 119 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 PASD1Q8IV76 773 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-206ENST00000376724 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
TRIM40-206ENST00000376724 TOMM70O94826 608 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 DARSP14868 501 aaKnown RBP13.82□□□□□ -0.2
TRIM40-206ENST00000376724 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 TUBB4BP68371 445 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 KYAT1Q16773 422 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 CFAP221Q4G0U5 840 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 SLFN11Q7Z7L1 901 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 PHLDB2Q86SQ0 1253 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 NT5DC3Q86UY8 548 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 TMEM40Q8WWA1 233 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 CYFIP2Q96F07 1278 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 RPGRIP1Q96KN7 1286 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 PNKPQ96T60 521 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 EIF2AQ9BY44 585 aaKnown RBP13.82□□□□□ -0.2
TRIM40-206ENST00000376724 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 ASB7Q9H672 318 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 SIX4Q9UIU6 781 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 HES2Q9Y543 173 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 ANK1P16157 1881 aa13.82□□□□□ -0.2
TRIM40-206ENST00000376724 GNAT1P11488 350 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 ELNP15502 786 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 CBX1P83916 185 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 TMEM132DQ14C87 1099 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 WDR72Q3MJ13 1102 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 C2CD6Q53TS8 623 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF677Q86XU0 584 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SPATA4Q8NEY3 305 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SNTG2Q9NY99 539 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 RARBP10826 455 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 UNGP13051 313 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 ASPAP45381 313 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 GJA9P57773 515 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SP3Q02447 781 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 TRIP12Q14669 1992 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 MESDQ14696 234 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SNX17Q15036 470 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 DCAF4L1Q3SXM0 396 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SLC27A1Q6PCB7 646 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 APOL6Q9BWW8 343 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 RNF186Q9NXI6 227 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 CNOT8Q9UFF9 292 aaKnown RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
TRIM40-206ENST00000376724 STXBP5LQ9Y2K9 1186 aa13.81□□□□□ -0.2
TRIM40-206ENST00000376724 SEPT4O43236 478 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 CEP104O60308 925 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 GRM5P41594 1212 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms