RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 NPTXRO95502 500 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 PNMA6AP0CW24 399 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 ASPAP45381 313 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 YARSP54577 528 aaKnown RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 MYL6P60660 151 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 RBP5P82980 135 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 TRIM71Q2Q1W2 868 aaKnown RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 RHOT2Q8IXI1 618 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 VCPIP1Q96JH7 1222 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 CYP1A1P04798 512 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 NFICP08651 508 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 P4HA1P13674 534 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 GALCP54803 685 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 TFAMQ00059 246 aaKnown RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 ZNF572Q7Z3I7 529 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 LRRC52Q8N7C0 313 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 RFFLQ8WZ73 363 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 TRIM11Q96F44 468 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 SALL4Q9UJQ4 1053 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 GPR182O15218 404 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 CSDE1O75534 798 aaKnown RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 INHAP05111 366 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 PAEPP09466 180 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 MYBL1P10243 752 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 UNGP13051 313 aaPredicted RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 GRK4P32298 578 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 CLEC16AQ2KHT3 1053 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 ACAD10Q6JQN1 1059 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 SYCE1Q8N0S2 351 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 CDY2AQ9Y6F7 541 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 LSM8O95777 96 aaKnown RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 CHRNA1P02708 482 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 CYP1A2P05177 515 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
PDPN-202ENST00000376057 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 LRRC57Q8N9N7 239 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 SLC20A1Q8WUM9 679 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 ZNF518BQ9C0D4 1074 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 DPP3Q9NY33 737 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
PDPN-202ENST00000376057 CD4P01730 458 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 ITIH3Q06033 890 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 PTGISQ16647 500 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 CTNNBL1Q8WYA6 563 aaPredicted RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 RPGRIP1Q96KN7 1286 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 PACSIN1Q9BY11 444 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 TFR2Q9UP52 801 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 CAPN6Q9Y6Q1 641 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 ZNF623O75123 536 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 MOCS3O95396 460 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 PAX3P23760 479 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 RAB27AP51159 221 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 GPC5P78333 572 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 CENPCQ03188 943 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 INCA1Q0VD86 236 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 ZNF667Q5HYK9 610 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 MEI1Q5TIA1 1274 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 CDR2LQ86X02 465 aaPredicted RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 RBBP8NLQ8NC74 664 aaPredicted RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 LCMT1Q9UIC8 334 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 KIAA1257Q9ULG3 409 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
PDPN-202ENST00000376057 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
PDPN-202ENST00000376057 EFCAB8A8MWE9 144 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 MMEP08473 750 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 FGFR4P22455 802 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 OSTNP61366 133 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 BEST2Q8NFU1 509 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 ARID3AQ99856 593 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 CISHQ9NSE2 258 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 SNTG2Q9NY99 539 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 UVRAGQ9P2Y5 699 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 GTF3C4Q9UKN8 822 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms