RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CCNB1P14635 433 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 STAT2P52630 851 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ATP11AP98196 1134 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 DNAJC3Q13217 504 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ANKRD20A3Q5VUR7 823 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 CPA5Q8WXQ8 436 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 PI4K2AQ9BTU6 479 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 UNC5CO95185 931 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 GAS8O95995 478 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 RALAP11233 206 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 ATP2A2P16615 1042 aaKnown RBP15□□□□□ -0.01
CLCNKA-202ENST00000375692 PEX3P56589 373 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 RNF43Q68DV7 783 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 B3GNT9Q6UX72 402 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 PLCD4Q9BRC7 762 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 SLCO1B3Q9NPD5 702 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 MROH7Q68CQ1 1323 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 GSTTP1A0A1W2PQM5 241 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 CDH16O75309 829 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 UPP2O95045 317 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 TARSP26639 723 aaKnown RBP15□□□□□ -0.01
CLCNKA-202ENST00000375692 ADSSP30520 456 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 ATL2Q8NHH9 583 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 MICAL1Q8TDZ2 1067 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 KIFC3Q9BVG8 833 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 PLVAPQ9BX97 442 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 KIF9Q9HAQ2 790 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 BATF3Q9NR55 127 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 LGALS13Q9UHV8 139 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 HAO1Q9UJM8 370 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 ZHX2Q9Y6X8 837 aa15□□□□□ -0.01
CLCNKA-202ENST00000375692 POLR2AP24928 1970 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 ADGRA3Q8IWK6 1321 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 TCEA3O75764 348 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 PLS3P13797 630 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 ITGB5P18084 799 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 CCNHP51946 323 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 STRN3Q13033 797 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 SNRNP35Q16560 246 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 CLEC16AQ2KHT3 1053 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 IZUMO3Q5VZ72 239 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 ANKS1BQ7Z6G8 1248 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 ERP27Q96DN0 273 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 MRRFQ96E11 262 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 DICER1Q9UPY3 1922 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 SORBS3O60504 671 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 SSTR3P32745 418 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 GJC1P36383 396 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 MKRN3Q13064 507 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 NAIF1Q69YI7 327 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 CAPN12Q6ZSI9 719 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 VSIG1Q86XK7 387 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 DDX27Q96GQ7 796 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 CHKBQ9Y259 395 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 TMX2Q9Y320 296 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 NEU2Q9Y3R4 380 aa14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-202ENST00000375692 FAM47DPA6NHR8 397 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 MUTP22033 750 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ABL2P42684 1182 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 RARRES1P49788 294 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 IL9RQ01113 521 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 KRT39Q6A163 491 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 C12orf56Q8IXR9 622 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 MAML1Q92585 1016 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ZMYND8Q9ULU4 1186 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ADM5C9JUS6 153 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 POC1B-GALNT4F8VUJ3 575 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 PPP1R21Q6ZMI0 780 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 GLIS1Q8NBF1 620 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 FBF1Q8TES7 1133 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 PARD3BQ8TEW8 1205 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 GRK7Q8WTQ7 553 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 NT5C1BQ96P26 610 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 RBM15Q96T37 977 aaKnown RBP eCLIP14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ZNF341Q9BYN7 854 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 EURLQ9NYK6 297 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 GRID1Q9ULK0 1009 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 PHTF1Q9UMS5 762 aa14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ZNFX1Q9P2E3 1918 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 RBBP6Q7Z6E9 1792 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-202ENST00000375692 ASNSP08243 561 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 GCAP28676 217 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 MAGEA4P43358 317 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 GTF2BQ00403 316 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 CAV1Q03135 178 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 SPP2Q13103 211 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 TAF11Q15544 211 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 SYDE1Q6ZW31 735 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 MCOLN2Q8IZK6 566 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 C4orf33Q8N1A6 199 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ANKRD35Q8N283 1001 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 CCDC77Q9BR77 488 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ADARB2Q9NS39 739 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms