RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 SLC13A1Q9BZW2 595 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 DEFB129Q9H1M3 183 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 PAK5Q9P286 719 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 MMP14P50281 582 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 RPAINQ86UA6 219 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 COL23A1Q86Y22 540 aaPredicted RBP20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 CYFIP2Q96F07 1278 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SERPINB12Q96P63 405 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 EHD2Q9NZN4 543 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SUN2Q9UH99 717 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SNX9Q9Y5X1 595 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 PHF20L1A8MW92 1017 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SERPINB9P50453 376 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 MEA1Q16626 185 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SCFD2Q8WU76 684 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SPDL1Q96EA4 605 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 HBP1O60381 514 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 ADORA2BP29275 332 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 RFC1P35251 1148 aaPredicted RBP20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 C1orf146Q5VVC0 180 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 MTHFD1LQ6UB35 978 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 CASKIN2Q8WXE0 1202 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 TMEM120BA0PK00 339 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 APRTP07741 180 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 SERPINB4P48594 390 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
TGFBR1-201ENST00000374990 F8W8V4 182 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ARPP19P56211 112 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 C4orf22Q6V702 233 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ST13P4Q8IZP2 240 aaPredicted RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 PNMA5Q96PV4 448 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 EPAS1Q99814 870 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 NT5C1AQ9BXI3 368 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 MEI1Q5TIA1 1274 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 TTC8Q8TAM2 541 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 SLC16A10Q8TF71 515 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 A0A087X0B3 334 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 F8VZ95 297 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 POLRMTO00411 1230 aaKnown RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ITGA8P53708 1063 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 SEC24CP53992 1094 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 AP1B1Q10567 949 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 NDE1Q9NXR1 346 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ZC3H7BQ9UGR2 993 aaKnown RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 DBR1Q9UK59 544 aaKnown RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 BTNL9Q6UXG8 535 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 RYBPQ8N488 228 aaPredicted RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 KCNN4O15554 427 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 CST8O60676 142 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 RARGP13631 454 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ATF7IP2Q5U623 682 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ZNF571Q7Z3V5 609 aaPredicted RBP20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 ANKMY2Q8IV38 441 aa20.56■□□□□ 0.88
TGFBR1-201ENST00000374990 HSD17B4P51659 736 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 TMEM119Q4V9L6 283 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 SCN4BQ8IWT1 228 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 C4orf19Q8IY42 314 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 AGGF1Q8N302 714 aaeCLIP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 LRRIQ3A6PVS8 624 aaPredicted RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 TRPM8Q7Z2W7 1104 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 CAVIN3Q969G5 261 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 MED15Q96RN5 788 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 RANBP17Q9H2T7 1088 aaKnown RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 ATMINO43313 823 aaPredicted RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 MAPTP10636 758 aaKnown RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 EN1Q05925 392 aaPredicted RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 ACTN3Q08043 901 aaPredicted RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 CUL2Q13617 745 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 CBWD2Q8IUF1 395 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 ANKZF1Q9H8Y5 726 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 KLHL11Q9NVR0 708 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 ARP10275 920 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 SHMT1P34896 483 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 AP1ARQ63HQ0 302 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 ZNF507Q8TCN5 953 aa20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 FAF1Q9UNN5 650 aaPredicted RBP20.55■□□□□ 0.88
TGFBR1-201ENST00000374990 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 DIAPH2O60879 1101 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 STIP1P31948 543 aaKnown RBP20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 CBWD1Q9BRT8 395 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 RALAP11233 206 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 MORF4L2Q15014 288 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 GTF3C2Q8WUA4 911 aaPredicted RBP20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 BLOC1S4Q9NUP1 217 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 OGTO15294 1046 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 CORO7P57737 925 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 ZNF200P98182 395 aaPredicted RBP20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 CCNYL1Q8N7R7 359 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 SPATA18Q8TC71 538 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 ERAP1Q9NZ08 941 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 NFKBIAP25963 317 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 ELF1P32519 619 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 SSTR3P32745 418 aaPredicted RBP20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 AP2B1P63010 937 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 TEDDM1Q5T9Z0 273 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 MTMR8Q96EF0 704 aa20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 DDTLA6NHG4 134 aaPredicted RBP20.54■□□□□ 0.88
TGFBR1-201ENST00000374990 CYTH3O43739 400 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms