RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-202ENST00000374676 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-202ENST00000374676 IRF2BP1Q8IU81 584 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 GPR65Q8IYL9 337 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 DEFB123Q8N688 67 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 C3orf58Q8NDZ4 430 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 GDPD5Q8WTR4 605 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 RABGGTAQ92696 567 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 BPIFA3Q9BQP9 254 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 NAT10Q9H0A0 1025 aaKnown RBP12.27□□□□□ -0.45
HSPG2-202ENST00000374676 DNAJC25Q9H1X3 360 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 SIX4Q9UIU6 781 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 VWA8A3KMH1 1905 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 PPEF2O14830 753 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 CAVIN2O95810 425 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 IGFBP6P24592 240 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 DNAJB1P25685 340 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 PNPLA4P41247 253 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 AARSP49588 968 aaKnown RBP eCLIP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 LILRA4P59901 499 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 PTPROQ16827 1216 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 ZACNQ401N2 412 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 PDE12Q6L8Q7 609 aaKnown RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 C15orf39Q6ZRI6 1047 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 SV2AQ7L0J3 742 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 Q7L0L9 218 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 TMEM130Q8N3G9 435 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 SLC35C1Q96A29 364 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 MRPL38Q96DV4 380 aaKnown RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 HERC2P3Q9BVR0 1158 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 NGRNQ9NPE2 291 aaKnown RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 CHST7Q9NS84 486 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 AGAP1Q9UPQ3 857 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 NUB1Q9Y5A7 615 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 SF3B1O75533 1304 aaKnown RBP eCLIP12.26□□□□□ -0.454e-6■■■■■ 76.2
HSPG2-202ENST00000374676 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
HSPG2-202ENST00000374676 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-202ENST00000374676 ATG2AQ2TAZ0 1938 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 M0QZQ0 153 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 FSCN2O14926 492 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 PMM2O15305 246 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 STAU1O95793 577 aaKnown RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 CST3P01034 146 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 ITGB3P05106 788 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 CTSAP10619 480 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 POLR2BP30876 1174 aaKnown RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 BRCC3P46736 316 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TAF6P49848 677 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 ERVFC1P60507 584 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TIGD5Q53EQ6 642 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 KRT39Q6A163 491 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TAS1R1Q7RTX1 841 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 VPS52Q8N1B4 723 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 FAM84AQ96KN4 292 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 SUSD3Q96L08 255 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 FAM161BQ96MY7 647 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 CDX2Q99626 313 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 ZBP1Q9H171 429 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TMEM8AQ9HCN3 771 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 TLR9Q9NR96 1032 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 SSX2IPQ9Y2D8 614 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
HSPG2-202ENST00000374676 NFE2L3Q9Y4A8 694 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 IRAK3Q9Y616 596 aa12.25□□□□□ -0.45
HSPG2-202ENST00000374676 ARHGEF37A1IGU5 675 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SYN3O14994 580 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SPTLC1O15269 473 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 LILRB3O75022 631 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 PHACTR2O75167 634 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 KRT19P08727 400 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 FGFR3P22607 806 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 ATICP31939 592 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 GCLMP48507 274 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 MYL5Q02045 173 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 DSG1Q02413 1049 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 MYO1EQ12965 1108 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 BIRC3Q13489 604 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 TRPC3Q13507 836 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms