RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM213AQ9BRX8 229 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 ACAD9Q9H845 621 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 XPNPEP1Q9NQW7 623 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 UNCXA6NJT0 531 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 SPDYE16A6NNV3 312 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-203ENST00000374490 SPATA31C2B4DYI2 1134 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 RGS16O15492 202 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-203ENST00000374490 SUPT20HL2P0C7V6 817 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 SEC24CP53992 1094 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 ACTR2P61160 394 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 CENPCQ03188 943 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 PPP1R7Q15435 360 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 ZACNQ401N2 412 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 PRPF38BQ5VTL8 546 aaKnown RBP14.87□□□□□ -0.03
HMGCL-203ENST00000374490 ABHD15Q6UXT9 468 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 TATDN2Q93075 761 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 VCPIP1Q96JH7 1222 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 CLMNQ96JQ2 1002 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 POP1Q99575 1024 aaKnown RBP14.87□□□□□ -0.03
HMGCL-203ENST00000374490 ACTR5Q9H9F9 607 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-203ENST00000374490 ANAPC7Q9UJX3 599 aa14.87□□□□□ -0.03
HMGCL-203ENST00000374490 A0A0G2JLL6 359 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ANKRD65E5RJM6 399 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 CXCL11O14625 94 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 GAS8O95995 478 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 CYP1A1P04798 512 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ITIH2P19823 946 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 TBXAS1P24557 533 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 PIK3CAP42336 1068 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 NSFP46459 744 aaKnown RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 LIG3P49916 1009 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 PPIL2Q13356 520 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 PTK6Q13882 451 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 TMEM132BQ14DG7 1078 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 EMC2Q15006 297 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 SGO2Q562F6 1265 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ERMARDQ5T6L9 678 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 CEP128Q6ZU80 1094 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 PRRT2Q7Z6L0 340 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 IFNL1Q8IU54 200 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ZDHHC14Q8IZN3 488 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 BBXQ8WY36 941 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 RAPGEF5Q92565 580 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 XPO6Q96QU8 1125 aaKnown RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-203ENST00000374490 RIPK3Q9Y572 518 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 A0A0G2JMZ2 1700 aa14.86□□□□□ -0.03
HMGCL-203ENST00000374490 IRF6O14896 467 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 CAND2O75155 1236 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 HLA-DRAP01903 254 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 ATP5DP30049 168 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 ICAM3P32942 547 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 NAMPTP43490 491 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 MMP13P45452 471 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 POLGP54098 1239 aaPredicted RBP14.85□□□□□ -0.03
HMGCL-203ENST00000374490 TREML2Q5T2D2 321 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 C6orf89Q6UWU4 347 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 TAOK1Q7L7X3 1001 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 TAS1R3Q7RTX0 852 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 TRMT1LQ7Z2T5 733 aaKnown RBP14.85□□□□□ -0.03
HMGCL-203ENST00000374490 TAX1BP1Q86VP1 789 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 CACNA2D3Q8IZS8 1091 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 BTBD6Q96KE9 485 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 MRPL47Q9HD33 250 aaKnown RBP14.85□□□□□ -0.03
HMGCL-203ENST00000374490 CYP39A1Q9NYL5 469 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 PCDH10Q9P2E7 1040 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 AGO2Q9UKV8 859 aaKnown RBP14.85□□□□□ -0.03
HMGCL-203ENST00000374490 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
HMGCL-203ENST00000374490 RIPK2O43353 540 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 PROSCO94903 275 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 C4BPAP04003 597 aaKnown RBP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TMOD1P28289 359 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 RFC5P40937 340 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 AP3M2P53677 418 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 SLC29A2Q14542 456 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 GKAP1Q5VSY0 366 aaPredicted RBP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CCDC121Q6ZUS5 278 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 PACS2Q86VP3 889 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CCDC60Q8IWA6 550 aaPredicted RBP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 DEPTORQ8TB45 409 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CHMP6Q96FZ7 201 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 SNF8Q96H20 258 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CGRRF1Q99675 332 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 R3HDMLQ9H3Y0 253 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 ACP6Q9NPH0 428 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 KCNH4Q9UQ05 1017 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 PPME1Q9Y570 386 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 RASGRF2O14827 1237 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CLDN3O15551 220 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 RGS20O76081 388 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 ATG7O95352 703 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms