RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 KCNJ18B7U540 433 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 NT5C1B-RDH14C9J2C7 533 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 H3BNC9 293 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 SOX1O00570 391 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TRAPPC3O43617 180 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 N4BP1O75113 896 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 PHACTR2O75167 634 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 FGF18O76093 207 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 KIF4AO95239 1232 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 CST3P01034 146 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 ITGB3P05106 788 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 ATICP31939 592 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 PBX3P40426 434 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 GCLMP48507 274 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 AARSP49588 968 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 LILRA4P59901 499 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 ELAVL2Q12926 359 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TRPC3Q13507 836 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 KCNJ12Q14500 433 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TRIP11Q15643 1979 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 DCAF17Q5H9S7 520 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TDRD10Q5VZ19 366 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 LMBRD2Q68DH5 695 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 KRT39Q6A163 491 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 RNF168Q8IYW5 571 aaPredicted RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 SPPL3Q8TCT6 385 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TAF4BQ92750 862 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 TMEM169Q96HH4 297 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 CACNG4Q9UBN1 327 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 COQ4Q9Y3A0 265 aa10.71□□□□□ -0.69
PDZD11-202ENST00000374454 R3HCC1Q9Y3T6 440 aaKnown RBP10.71□□□□□ -0.69
PDZD11-202ENST00000374454 ANK1P16157 1881 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 PPEF2O14830 753 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 VNN1O95497 513 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 AFPP02771 609 aaKnown RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 ITGB1P05556 798 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 IGFBP6P24592 240 aaPredicted RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 MTIF2P46199 727 aaKnown RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 FMO5P49326 533 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 TAF6P49848 677 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 MXI1P50539 228 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CETN1Q12798 172 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 MYO1EQ12965 1108 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 BIRC3Q13489 604 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 GPM6BQ13491 265 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 NCOA4Q13772 614 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 MAN2A1Q16706 1144 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 SGSM1Q2NKQ1 1148 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 SV2CQ496J9 727 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CBWD6Q4V339 395 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 VWA3BQ502W6 1294 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CBWD3Q5JTY5 395 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CBWD5Q5RIA9 395 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 TCERG1LQ5VWI1 586 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 FUT10Q6P4F1 479 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 SPRED2Q7Z698 418 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CREBRFQ8IUR6 639 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 C3orf58Q8NDZ4 430 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 BCL7CQ8WUZ0 217 aaPredicted RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 FAM84AQ96KN4 292 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 SUSD3Q96L08 255 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 ZNF560Q96MR9 790 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 TUBGCP2Q9BSJ2 902 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 GPR62Q9BZJ7 368 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 LMAN2LQ9H0V9 348 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 TTYH1Q9H313 450 aaPredicted RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 CHST7Q9NS84 486 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 GDAP2Q9NXN4 497 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 LIMA1Q9UHB6 759 aaKnown RBP10.7□□□□□ -0.7
PDZD11-202ENST00000374454 NUB1Q9Y5A7 615 aa10.7□□□□□ -0.7
PDZD11-202ENST00000374454 TDRD15B5MCY1 1934 aaKnown RBP10.69□□□□□ -0.7
PDZD11-202ENST00000374454 ARHGEF37A1IGU5 675 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 GTPBP10A4D1E9 387 aaKnown RBP10.69□□□□□ -0.7
PDZD11-202ENST00000374454 KPNA7A9QM74 516 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 F8W810 466 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 M0QZQ0 153 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 SYN3O14994 580 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 SPTLC1O15269 473 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 HLA-DRAP01903 254 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 SOD2P04179 222 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 KRT19P08727 400 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 FAM163BP0C2L3 166 aa10.69□□□□□ -0.7
PDZD11-202ENST00000374454 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
PDZD11-202ENST00000374454 MYL6P60660 151 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms