RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 LBHD1Q9BQE6 289 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-201ENST00000373888 GANQ9H2C0 597 aa15.76■□□□□ 0.11
SMPDL3B-201ENST00000373888 FAM207AQ9NSI2 230 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-201ENST00000373888 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
SMPDL3B-201ENST00000373888 DAAM1Q9Y4D1 1078 aa15.76■□□□□ 0.11
SMPDL3B-201ENST00000373888 ANO9A1A5B4 782 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 EPHB6O15197 1021 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 STAU1O95793 577 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 POMCP01189 267 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 KRT19P08727 400 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 POLR2BP30876 1174 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 ATICP31939 592 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 MYL6P60660 151 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 DEFB103AP81534 67 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 APBA1Q02410 837 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 SGSM1Q2NKQ1 1148 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 WDR44Q5JSH3 913 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 C9orf57Q5W0N0 161 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 ABI1Q8IZP0 508 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 TMEM130Q8N3G9 435 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 TAF4BQ92750 862 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 IMPG2Q9BZV3 1241 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 XYLT2Q9H1B5 865 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 VRTNQ9H8Y1 702 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 APEX2Q9UBZ4 518 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 AGAP1Q9UPQ3 857 aa15.75■□□□□ 0.11
SMPDL3B-201ENST00000373888 A0A1W2PQJ5 194 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 PIRO00625 290 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 DGKIO75912 1065 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 GYPCP04921 128 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 UCHL3P15374 230 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 RFX1P22670 979 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 NOP14P78316 857 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 DSC1Q08554 894 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 TUSC3Q13454 348 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 LRRC52Q8N7C0 313 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 HERVK_113Q902F9 699 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 NT5C1BQ96P26 610 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 PI4K2AQ9BTU6 479 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 MRPL9Q9BYD2 267 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 GOLGA2P5Q9HBQ8 144 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 PYCARDQ9ULZ3 195 aa15.74■□□□□ 0.11
SMPDL3B-201ENST00000373888 SKILP12757 684 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 GATMP50440 423 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 LRMPQ12912 555 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 ZNF699Q32M78 642 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 FAXDC2Q96IV6 333 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 UROC1Q96N76 676 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 APOBEC3GQ9HC16 384 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 KCND1Q9NSA2 647 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CEP72Q9P209 647 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 TDRD15B5MCY1 1934 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 COL4A6Q14031 1691 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 TBKBP1A7MCY6 615 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 ZBBXA8MT70 800 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 PPEF2O14830 753 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 UPP2O95045 317 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CASP14P31944 242 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 PNPLA4P41247 253 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 TERF1P54274 439 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 POLR2FP61218 127 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CCZ1BP86790 482 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 GCNT1Q02742 428 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 SPOPLQ6IQ16 392 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 PPFIBP1Q86W92 1011 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 ARHGEF19Q8IW93 802 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 ZNF689Q96CS4 500 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 HPDLQ96IR7 371 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 FAM81BQ96LP2 452 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 ZNF560Q96MR9 790 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CXXC1Q9P0U4 656 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 NUB1Q9Y5A7 615 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 FHOD1Q9Y613 1164 aa15.73■□□□□ 0.11
SMPDL3B-201ENST00000373888 CASTOR2A6NHX0 329 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 PODXLO00592 558 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 CCP110O43303 1012 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 B4GALT3O60512 393 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 DDHD2O94830 711 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 TPM1P09493 284 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 CLCNKBP51801 687 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 RNASELQ05823 741 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 UPP1Q16831 310 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 RASIP1Q5U651 963 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 IQCEQ6IPM2 695 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
SMPDL3B-201ENST00000373888 ZNF280BQ86YH2 543 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms