RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CYP2C9P11712 490 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 FGFR4P22455 802 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 GRIN1Q05586 938 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 SPDYAQ5MJ70 313 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 LVRNQ6Q4G3 990 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 ZNF555Q8NEP9 628 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 TMA16Q96EY4 203 aaKnown RBP15.06■□□□□ 0
TRAF1-201ENST00000373887 THPOP40225 353 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 CENPAP49450 140 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 EMC2Q15006 297 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 ANKS3Q6ZW76 656 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 BHMTQ93088 406 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 DDX47Q9H0S4 455 aaKnown RBP15.06■□□□□ 0
TRAF1-201ENST00000373887 HDAC6Q9UBN7 1215 aa15.06■□□□□ 0
TRAF1-201ENST00000373887 BCORL1Q5H9F3 1711 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 ZC3H4Q9UPT8 1303 aaKnown RBP15.05■□□□□ 0
TRAF1-201ENST00000373887 TYK2P29597 1187 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 SULT1E1P49888 294 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 GTF2A2P52657 109 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 MGAT5BQ3V5L5 792 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 CEP78Q5JTW2 689 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 PKN3Q6P5Z2 889 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 DYRK4Q9NR20 520 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 GIMAP4Q9NUV9 329 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 KLK14Q9P0G3 267 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ 0
TRAF1-201ENST00000373887 CSF1RP07333 972 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 AKT1S1Q96B36 256 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 ZNF560Q96MR9 790 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 MTFR1LQ9H019 292 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 EPC1Q9H2F5 836 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 MTIF3Q9H2K0 278 aaKnown RBP15.05■□□□□ 0
TRAF1-201ENST00000373887 SELENONQ9NZV5 590 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 ADAM21Q9UKJ8 722 aa15.05■□□□□ 0
TRAF1-201ENST00000373887 CALB1P05937 261 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 ITGA4P13612 1032 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 TBXAS1P24557 533 aaPredicted RBP15.05■□□□□ -0
TRAF1-201ENST00000373887 MED21Q13503 144 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 PRMT1Q99873 361 aaKnown RBP15.05■□□□□ -0
TRAF1-201ENST00000373887 TJP2Q9UDY2 1190 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 CYP26A1O43174 497 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 CAPN15O75808 1086 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 SERPINB10P48595 397 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 DGKDQ16760 1214 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 COG1Q8WTW3 980 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 STAP1Q9ULZ2 295 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 DIP2CQ9Y2E4 1556 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 CCDC78A2IDD5 438 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 FTLP02792 175 aaPredicted RBP15.05■□□□□ -0
TRAF1-201ENST00000373887 SLC9A1P19634 815 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 NR1H3Q13133 447 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 EFHC2Q5JST6 749 aa15.05■□□□□ -0
TRAF1-201ENST00000373887 EML4Q9HC35 981 aaKnown RBP15.05■□□□□ -0
TRAF1-201ENST00000373887 E2F8A0AVK6 867 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 EYA4O95677 639 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 RPS12P25398 132 aaKnown RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 ACER1Q8TDN7 264 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 THAP11Q96EK4 314 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 KIZQ2M2Z5 673 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 FBXO33Q7Z6M2 555 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 SNF8Q96H20 258 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 NYAP2Q9P242 653 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 KRT87PA6NCN2 255 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 C5orf58C9J3I9 102 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 NPTXRO95502 500 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 TCF3P15923 654 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 CNGA3Q16281 694 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 ZC2HC1CQ53FD0 456 aaPredicted RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 TRIM54Q9BYV2 358 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 ADARB2Q9NS39 739 aaKnown RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 HSPBP1Q9NZL4 362 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 TAL1P17542 331 aaPredicted RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 TMEM132DQ14C87 1099 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 ADCK2Q7Z695 626 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 ANGPT2O15123 496 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 AKAP10O43572 662 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 ASMTLO95671 621 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 PGM1P36871 562 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 CAV1Q03135 178 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 HIC1Q14526 733 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 AMHR2Q16671 573 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 XKR3Q5GH77 459 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 ICE2Q659A1 982 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 RNF180Q86T96 592 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 SRPK1Q96SB4 655 aaKnown RBP15.04■□□□□ -0
TRAF1-201ENST00000373887 OSBPL10Q9BXB5 764 aa15.04■□□□□ -0
TRAF1-201ENST00000373887 PPP3CCP48454 512 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 CAPRIN2Q6IMN6 1127 aaKnown RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 KCTD17Q8N5Z5 321 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 PGBD4Q96DM1 585 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 REEP2Q9BRK0 252 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 JMJD4Q9H9V9 463 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 TUFT1Q9NNX1 390 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 FAM49BQ9NUQ9 324 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 DONSONQ9NYP3 566 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms