RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ARHGEF26Q96DR7 871 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 SEMA4AQ9H3S1 761 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 O00370 1275 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 CYP11B1P15538 503 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 KDSRQ06136 332 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 C3orf62Q6ZUJ4 267 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 TMEM143Q96AN5 459 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 FBXO40Q9UH90 709 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.536e-7■■■■■ 43.2
PTPRU-202ENST00000373779 EFNA5P52803 228 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 DEUP1Q05D60 604 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 ACAD11Q709F0 780 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 CYP4F11Q9HBI6 524 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 TRIM33Q9UPN9 1127 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 BAZ2BQ9UIF8 2168 aaKnown RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 NVLO15381 856 aaKnown RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 FSBPO95073 299 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 ALDH18A1P54886 795 aaKnown RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 NFX1Q12986 1120 aaKnown RBP18.35■□□□□ 0.53
PTPRU-202ENST00000373779 PTK7Q13308 1070 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 SLC26A7Q8TE54 656 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 SDCCAG3Q96C92 435 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 EXTL3O43909 919 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 COG2Q14746 738 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 PDZD8Q8NEN9 1154 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 DNAJC9Q8WXX5 260 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 TNFRSF25Q93038 417 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 FGD4Q96M96 766 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 CBWD1Q9BRT8 395 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 PHTF1Q9UMS5 762 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 MTO1Q9Y2Z2 717 aaKnown RBP18.34■□□□□ 0.53
PTPRU-202ENST00000373779 NUB1Q9Y5A7 615 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 F5H423 210 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-202ENST00000373779 KCNN4O15554 427 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 ANKEF1Q9NU02 776 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 CHMP2BQ9UQN3 213 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 TARSP26639 723 aaKnown RBP18.34■□□□□ 0.53
PTPRU-202ENST00000373779 FUT2Q10981 343 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 HIC1Q14526 733 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 ARL13BQ3SXY8 428 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 YY1AP1Q9H869 796 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 SPATA31A5Q5VU36 1347 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 SPATA31A7Q8IWB4 1347 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 IGSF9BQ9UPX0 1349 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 KCNMA1Q12791 1236 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 RASSF3Q86WH2 238 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 BAP1Q92560 729 aa18.34■□□□□ 0.53
PTPRU-202ENST00000373779 KLF6Q99612 283 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-202ENST00000373779 RIPK2O43353 540 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 HNRNPH3P31942 346 aaKnown RBP18.33■□□□□ 0.53
PTPRU-202ENST00000373779 GEMIN4P57678 1058 aaKnown RBP18.33■□□□□ 0.53
PTPRU-202ENST00000373779 MDH1BQ5I0G3 518 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 ARHGAP18Q8N392 663 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 MREGQ8N565 214 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 TRAPPC3O43617 180 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 CNPY4Q8N129 248 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 GLIS3Q8NEA6 775 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 KIFC3Q9BVG8 833 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.53
PTPRU-202ENST00000373779 POLLQ9UGP5 575 aa18.33■□□□□ 0.53
PTPRU-202ENST00000373779 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 UBOX5O94941 541 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 WRNIP1Q96S55 665 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 DHX35Q9H5Z1 703 aaKnown RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 MANSC1Q9H8J5 431 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 PFDN6O15212 129 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 ATP6V1G2O95670 118 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 DYNC1I2Q13409 638 aaKnown RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 EMC2Q15006 297 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 DNAL1Q4LDG9 190 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 TTC39CQ8N584 583 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 LPAR1Q92633 364 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 ACAP3Q96P50 834 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 OLFM3Q96PB7 478 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 DRC3Q9H069 523 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 ZC3H7BQ9UGR2 993 aaKnown RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 SMAPO00193 183 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 BAATQ14032 418 aaPredicted RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 PPIL6Q8IXY8 311 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 RNF168Q8IYW5 571 aaPredicted RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 TRIML2Q8N7C3 387 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 ZNF668Q96K58 619 aaPredicted RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 UPF3AQ9H1J1 476 aaKnown RBP18.33■□□□□ 0.52
PTPRU-202ENST00000373779 RAB6BQ9NRW1 208 aa18.33■□□□□ 0.52
PTPRU-202ENST00000373779 CCNA1P78396 465 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 CASZ1Q86V15 1759 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 ANP32DO95626 131 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 ZFXP17010 805 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms