RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 C16orf89Q6UX73 402 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 ZNF555Q8NEP9 628 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 IRX2Q9BZI1 471 aaPredicted RBP18.93■□□□□ 0.62
COL16A1-203ENST00000373672 SMARCAD1Q9H4L7 1026 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 PKD2L2Q9NZM6 624 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 EHD2Q9NZN4 543 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 FAM47DPA6NHR8 397 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 IL18RAPO95256 599 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 RGS7P49802 495 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 CRB1P82279 1406 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 PSMD14O00487 310 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 CYBBP04839 570 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 NEK2P51955 445 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 TBC1D16Q8TBP0 767 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 PPP1R36Q96LQ0 422 aa18.93■□□□□ 0.62
COL16A1-203ENST00000373672 TMEM253P0C7T8 217 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 SYCP2LQ5T4T6 812 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 CAPRIN2Q6IMN6 1127 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 TRAPPC11Q7Z392 1133 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 PTPRN2Q92932 1015 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 AGAP3Q96P47 875 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 MRPL1Q9BYD6 325 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 PCDHB8Q9UN66 801 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 REREQ9P2R6 1566 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 KRT16P08779 473 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 HIST1H2AGP0C0S8 130 aaPredicted RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 HIST1H2ADP20671 130 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 ATICP31939 592 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 SERPINB10P48595 397 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 FXR1P51114 621 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 HIST1H2AHQ96KK5 128 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 CCT8L2Q96SF2 557 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 HIST1H2AJQ99878 128 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 H2AFJQ9BTM1 129 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 USP10Q14694 798 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 CNGA3Q16281 694 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 TMCO5AQ8N6Q1 288 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 ROPN1BQ9BZX4 212 aaPredicted RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 ROPN1Q9HAT0 212 aaPredicted RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 RBM12Q9NTZ6 932 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 PAK5Q9P286 719 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 SYTL3Q4VX76 610 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 PPP4R4Q6NUP7 873 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 JAMLQ86YT9 394 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 STX19Q8N4C7 294 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 DBR1Q9UK59 544 aaKnown RBP18.92■□□□□ 0.62
COL16A1-203ENST00000373672 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
COL16A1-203ENST00000373672 NDUFB10O96000 172 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 MAP4P27816 1152 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 CENPCQ03188 943 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 PTK7Q13308 1070 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 STRIP1Q5VSL9 837 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 SH2D3CQ8N5H7 860 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 RNF181Q9P0P0 153 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 GGT7Q9UJ14 662 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 SRP72O76094 671 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 STK4Q13043 487 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 C16orf86Q6ZW13 317 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 TBC1D19Q8N5T2 526 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 POLRMTO00411 1230 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 MYL2P10916 166 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 CRAMP1Q96RY5 1269 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 PCMTD2Q9NV79 361 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 AFF2P51816 1311 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 TMEM8AQ9HCN3 771 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 MRGBPQ9NV56 204 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 PXDNLA1KZ92 1463 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 P4HA2O15460 535 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 ZNF677Q86XU0 584 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 C4orf33Q8N1A6 199 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 CMTM5Q96DZ9 223 aa18.91■□□□□ 0.62
COL16A1-203ENST00000373672 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
COL16A1-203ENST00000373672 CD4P01730 458 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 GTF2H3Q13889 308 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 TC2NQ8N9U0 490 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 SEPT1Q8WYJ6 367 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 TASP1Q9H6P5 420 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 EIF4E1BA6NMX2 242 aaKnown RBP18.9■□□□□ 0.62
COL16A1-203ENST00000373672 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 PJA2O43164 708 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 RAD51CO43502 376 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 KLHL2O95198 593 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 CDH2P19022 906 aaPredicted RBP18.9■□□□□ 0.62
COL16A1-203ENST00000373672 SNX17Q15036 470 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 CYTH1Q15438 398 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 PRUNE1Q86TP1 453 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 TRIM10Q9UDY6 481 aa18.9■□□□□ 0.62
COL16A1-203ENST00000373672 CDYLQ9Y232 598 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms