RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 DNERQ8NFT8 737 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 MCEEQ96PE7 176 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 RBM15Q96T37 977 aaKnown RBP eCLIP11.04□□□□□ -0.642e-8■■■■□ 24.5
NUP188-201ENST00000372577 ZBTB18Q99592 522 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 VPS11Q9H270 941 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 MRGBPQ9NV56 204 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 EHD2Q9NZN4 543 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 SUN2Q9UH99 717 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 CHUKO15111 745 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 SULT1E1P49888 294 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TPI1P60174 286 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TBC1D1Q86TI0 1168 aaPredicted RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 NSMCE4AQ9NXX6 385 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 PSMC3IPQ9P2W1 217 aaPredicted RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 MTSS1O43312 755 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 NOTUMQ6P988 496 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 ZNF720Q7Z2F6 126 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 ASAP3Q8TDY4 903 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 PPWD1Q96BP3 646 aaKnown RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 SCOCQ9UIL1 159 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 PCSK1P29120 753 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 NME3Q13232 169 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TAF11Q15544 211 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 UGP2Q16851 508 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 FAM47EQ6ZV65 393 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 ZSWIM1Q9BR11 485 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TRABDQ9H4I3 376 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 GAKO14976 1311 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 RIC1Q4ADV7 1423 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 LCP1P13796 627 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 GPD1P21695 349 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 TCF7P36402 384 aaPredicted RBP11.04□□□□□ -0.64
NUP188-201ENST00000372577 ANO4Q32M45 955 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 WWP1Q9H0M0 922 aa11.04□□□□□ -0.64
NUP188-201ENST00000372577 SPAG7O75391 227 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 PYGBP11216 843 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 FGFR4P22455 802 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 CPT1AP50416 773 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 TAF1CQ15572 869 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 PID1Q7Z2X4 250 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 SCFD1Q8WVM8 642 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 STOML1Q9UBI4 398 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 GSTA4O15217 222 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 EIF3HO15372 352 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■■■□□ 15.9
NUP188-201ENST00000372577 SPATA2LQ8IUW3 424 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 ZNF507Q8TCN5 953 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 TRIM51Q9BSJ1 452 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 PXMP2Q9NR77 195 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 ARL2BPQ9Y2Y0 163 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 MYO5BQ9ULV0 1848 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 DDTLA6NHG4 134 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 KCNN4O15554 427 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 OCRLQ01968 901 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 VEPH1Q14D04 833 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 BOLA3Q53S33 107 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 ERO1BQ86YB8 467 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 MYCBPQ99417 103 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 CGRRF1Q99675 332 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 SNX2O60749 519 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 MAPRE2Q15555 327 aa11.03□□□□□ -0.64
NUP188-201ENST00000372577 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
NUP188-201ENST00000372577 CES2O00748 559 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 CYP3A4P08684 503 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 TYK2P29597 1187 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 ESRRGP62508 458 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 RNF219Q5W0B1 726 aaPredicted RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 ZC3H18Q86VM9 953 aaKnown RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 EFHBQ8N7U6 833 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 C3orf20Q8ND61 904 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 ZFATQ9P243 1243 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 UBQLN1Q9UMX0 589 aaKnown RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 SLC4A1P02730 911 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 ARP10275 920 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 PDK1Q15118 436 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms