RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 CASTOR2A6NHX0 329 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 RNF225M0QZC1 329 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 HOXA2O43364 376 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 B4GALT3O60512 393 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 AMHP03971 560 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 THP07101 528 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 TPM1P09493 284 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 RFX1P22670 979 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 RBP5P82980 135 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 PHLDB3Q6NSJ2 640 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 PSRC1Q6PGN9 363 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 SCARA5Q6ZMJ2 495 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 C16orf59Q7L2K0 433 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 RRAGAQ7L523 313 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 PPM1KQ8N3J5 372 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 DPF3Q92784 378 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 KAT5Q92993 513 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 ARID3AQ99856 593 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 DNAJC12Q9UKB3 198 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 NUB1Q9Y5A7 615 aa12.39□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZBBXA8MT70 800 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 AKR1B15C9JRZ8 316 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 EFCAB14O75071 495 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 LRPAP1P30533 357 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 KCNJ6P48051 423 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 ADKP55263 362 aaKnown RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 GSDMDP57764 484 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 E4F1Q66K89 784 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 PDXDC1Q6P996 788 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 CCDC186Q7Z3E2 898 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 BAP1Q92560 729 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 TATDN2Q93075 761 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 HPDLQ96IR7 371 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 NAA15Q9BXJ9 866 aaKnown RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 UBE2TQ9NPD8 197 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 FBXL5Q9UKA1 691 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-202ENST00000372317 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 LRRC53A6NM62 1247 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 TBKBP1A7MCY6 615 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 F8VZ95 297 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 PODXLO00592 558 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 UPP2O95045 317 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ATICP31939 592 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 KRT9P35527 623 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ASPAP45381 313 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 JAM2P57087 298 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZBED6P86452 979 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 GCNT1Q02742 428 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 DSC1Q08554 894 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 TUSC3Q13454 348 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 CUL2Q13617 745 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 SGSM1Q2NKQ1 1148 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 TAF4BQ92750 862 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 LBHD1Q9BQE6 289 aaPredicted RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 TTC3P53804 2025 aa12.37□□□□□ -0.43
CALCOCO2-202ENST00000372317 PIRO00625 290 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms