RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
LCN1-202ENST00000371781 NME7Q9Y5B8 376 aa11.71□□□□□ -0.53
LCN1-202ENST00000371781 SMIM28A0A1B0GU29 152 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ESPNB1AK53 854 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ZNF623O75123 536 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ZC3H11AO75152 810 aaKnown RBP eCLIP11.7□□□□□ -0.54
LCN1-202ENST00000371781 GFPT2O94808 682 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 SOX5P35711 763 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 MLH1P40692 756 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 KCNJ6P48051 423 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 AP3M2P53677 418 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 CCL23P55773 120 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 CDK17Q00537 523 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 GCNT1Q02742 428 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 BFSP2Q13515 415 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 ASIC2Q16515 512 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ZNF571Q7Z3V5 609 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 USP37Q86T82 979 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 ECHDC2Q86YB7 292 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 PALB2Q86YC2 1186 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 PPM1KQ8N3J5 372 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 SLC20A1Q8WUM9 679 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 SYN2Q92777 582 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 ANKRD36BP1Q96IX9 119 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 GAD1Q99259 594 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 RRAGDQ9NQL2 400 aaPredicted RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 TFR2Q9UP52 801 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 DERAQ9Y315 318 aa11.7□□□□□ -0.54
LCN1-202ENST00000371781 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
LCN1-202ENST00000371781 A0A0U1RQF3 1178 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SPTLC1O15269 473 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 ABL1P00519 1130 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 TNNC2P02585 160 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 TPM1P09493 284 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 RFX1P22670 979 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 CLCN1P35523 988 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 EIF4A3P38919 411 aaKnown RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 RAP1GAPP47736 663 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SCNN1GP51170 649 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 ZNF132P52740 706 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 FAM189BP81408 668 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 NCBP1Q09161 790 aaKnown RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 CUL2Q13617 745 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 ZNF699Q32M78 642 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SFMBT2Q5VUG0 894 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 NT5DC4Q86YG4 428 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 CD302Q8IX05 232 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 REXO1L1PQ8IX06 675 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SPAG5Q96R06 1193 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 NIF3L1Q9GZT8 377 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 C1orf112Q9NSG2 853 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 DPP3Q9NY33 737 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 HMGXB4Q9UGU5 601 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
LCN1-202ENST00000371781 DAAM1Q9Y4D1 1078 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
LCN1-202ENST00000371781 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 ARL5CA6NH57 179 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 DDX3XO00571 662 aaKnown RBP eCLIP11.68□□□□□ -0.54
LCN1-202ENST00000371781 INPPL1O15357 1258 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 STAU1O95793 577 aaKnown RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 SERPING1P05155 500 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 CLTBP09497 229 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 ITGA4P13612 1032 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 CHRNB2P17787 502 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 STAT1P42224 750 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 ARHGAP25P42331 645 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 GATMP50440 423 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 RAB27AP51159 221 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 KIF11P52732 1056 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 YARSP54577 528 aaKnown RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 ARID5AQ03989 594 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 PTK2Q05397 1052 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms