RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
EXOSC1-204ENST00000370902 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
EXOSC1-204ENST00000370902 TUBGCP4Q9UGJ1 667 aa12.11□□□□□ -0.47
EXOSC1-204ENST00000370902 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
EXOSC1-204ENST00000370902 FRYQ5TBA9 3013 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 HIP1RO75146 1068 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 MICAL2O94851 1124 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 SEC24BO95487 1268 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 GJA1P17302 382 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 PTPN2P17706 415 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 HOXC13P31276 330 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 PEX3P56589 373 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 HAUS3Q68CZ6 603 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 C1orf186Q6ZWK4 172 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 TRPV5Q9NQA5 729 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 DDX19AQ9NUU7 478 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
EXOSC1-204ENST00000370902 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 K7ERI5 159 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 TRAPPC3O43617 180 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 FAM189A1O60320 539 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 LRG1P02750 347 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 MCF2P10911 925 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CHRNB1P11230 501 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 VIPR2P41587 438 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 NEK4P51957 841 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 DMWDQ09019 674 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 TRIM29Q14134 588 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 RINT1Q6NUQ1 792 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 RNF19BQ6ZMZ0 732 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 FBXO18Q8NFZ0 1043 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 ERMNQ8TAM6 284 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 SNX29Q8TEQ0 813 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 DDX12PQ92771 950 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 MRPL4Q9BYD3 311 aaKnown RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 CYP4F11Q9HBI6 524 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 C2orf42Q9NWW7 574 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 NCDNQ9UBB6 729 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 NDRG2Q9UN36 371 aaKnown RBP12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 SCN1AP35498 2009 aa12.09□□□□□ -0.47
EXOSC1-204ENST00000370902 M0QZQ0 153 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 PRRG1O14668 218 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 OR4Q2P0C623 313 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 CDC25AP30304 524 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 TRAPPC10P48553 1259 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 ARPP19P56211 112 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 SATB1Q01826 763 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 TWF1Q12792 350 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 ZBTB6Q15916 424 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 CTXN3Q4LDR2 81 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 STXBP5Q5T5C0 1151 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 C8orf76Q96K31 380 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 LRRC3BQ96PB8 259 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 PNMA5Q96PV4 448 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 NELL2Q99435 816 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 ZFP14Q9HCL3 533 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
EXOSC1-204ENST00000370902 CCDC169A6NNP5 214 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 K7ESF4 209 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 PPEF2O14830 753 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 SLC16A4O15374 487 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 CXCL8P10145 99 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 MAPTP10636 758 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 PSMC3P17980 439 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.484e-7■■■□□ 15.2
EXOSC1-204ENST00000370902 LRPAP1P30533 357 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 GDI1P31150 447 aa12.07□□□□□ -0.48
EXOSC1-204ENST00000370902 RPL9P32969 192 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms