RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 GPRC5CQ9NQ84 441 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 GGA1Q9UJY5 639 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 NID2Q14112 1375 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 ABCA3Q99758 1704 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 TGFB1I1O43294 461 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 MYL2P10916 166 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 POLD1P28340 1107 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CCNFP41002 786 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 SMTNL2Q2TAL5 461 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CERKLQ49MI3 558 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 LIN9Q5TKA1 542 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 PPM1NQ8N819 430 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 PRPF31Q8WWY3 499 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 ZNF75CPQ92670 426 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 OSBPL8Q9BZF1 889 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 ANKFY1Q9P2R3 1169 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 MSH4O15457 936 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CD19P15391 556 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 RPA1P27694 616 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 PPP3CAQ08209 521 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 EFTUD2Q15029 972 aaKnown RBP eCLIP11.01□□□□□ -0.652e-11■■■■□ 20.4
PRPF38B-201ENST00000370021 CASC4Q6P4E1 433 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 OTOAQ7RTW8 1153 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 SLFN11Q7Z7L1 901 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 ARID3BQ8IVW6 561 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 POU5F2Q8N7G0 328 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 TCP10LQ8TDR4 215 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 USP6NLQ92738 828 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 NSL1Q96IY1 281 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 EPAS1Q99814 870 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 TMEM121Q9BTD3 319 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 TRAF3IP3Q9Y228 551 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CFLARO15519 480 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 HNRNPCP07910 306 aaKnown RBP eCLIP11.01□□□□□ -0.652e-14■■■■□ 22.7
PRPF38B-201ENST00000370021 BGNP21810 368 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 NPEPPSP55786 919 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 ICA1Q05084 483 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CDCA2Q69YH5 1023 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CENPUQ71F23 418 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 BRINP3Q76B58 766 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CYFIP1Q7L576 1253 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 MIER3Q7Z3K6 550 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CNKSR1Q969H4 720 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 UTP4Q969X6 686 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 ACAP3Q96P50 834 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 CD209Q9NNX6 404 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 PCSK1NQ9UHG2 260 aa11.01□□□□□ -0.65
PRPF38B-201ENST00000370021 TLR3O15455 904 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 FGRP09769 529 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 MCL1Q07820 350 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 CBWD2Q8IUF1 395 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 PYDC1Q8WXC3 89 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 MTBPQ96DY7 904 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 MANSC1Q9H8J5 431 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 IFT122Q9HBG6 1241 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 KIAA1586Q9HCI6 787 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 LRCH1Q9Y2L9 728 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 PCDHB4Q9Y5E5 795 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 POU5F1Q01860 360 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 TFDP1Q14186 410 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 PADI6Q6TGC4 694 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 TMEM270Q6UE05 265 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 MFN1Q8IWA4 741 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 ST13P4Q8IZP2 240 aaPredicted RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 XXYLT1Q8NBI6 393 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 DNAJC1Q96KC8 554 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 CENPKQ9BS16 269 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 CALN1Q9BXU9 219 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 NYXQ9GZU5 481 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 RIOX1Q9H6W3 641 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 ANLNQ9NQW6 1124 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 FAM237BA0A1B0GVD1 139 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 MAGEA13PA6NCF6 341 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 HNRNPDLO14979 420 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 LMNAP02545 664 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 GAP43P17677 238 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 HOXD13P35453 343 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 NEK3P51956 506 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 ACSBG2Q5FVE4 666 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 NAP1L4Q99733 375 aaKnown RBP11□□□□□ -0.65
PRPF38B-201ENST00000370021 TMEM120AQ9BXJ8 343 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 C1orf112Q9NSG2 853 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 PCYOX1Q9UHG3 505 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 ANGPTL2Q9UKU9 493 aa11□□□□□ -0.65
PRPF38B-201ENST00000370021 NHSL1Q5SYE7 1610 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 TBX10O75333 385 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 EYA4O95677 639 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 SLC34A1Q06495 639 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 ASPHQ12797 758 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms