RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 LRRN2O75325 713 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 PALMO75781 387 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 RFX1P22670 979 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 TNFSF9P41273 254 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 OSTNP61366 133 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 BFSP2Q13515 415 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 DNAAF5Q86Y56 855 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 THNSL1Q8IYQ7 743 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 SYT11Q9BT88 431 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-203ENST00000369747 PMM2O15305 246 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 SELPP16109 830 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 TCP1P17987 556 aaKnown RBP18.61■□□□□ 0.57
UBE3D-203ENST00000369747 NOTUMQ6P988 496 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 ZNF572Q7Z3I7 529 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-203ENST00000369747 TMEM192Q8IY95 271 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 SLC30A5Q8TAD4 765 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 LNX1Q8TBB1 728 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-203ENST00000369747 EIF2AQ9BY44 585 aaKnown RBP18.61■□□□□ 0.57
UBE3D-203ENST00000369747 PPP1R12CQ9BZL4 782 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 TMEM117Q9H0C3 514 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 HIPK3Q9H422 1215 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 ARFGAP3Q9NP61 516 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
UBE3D-203ENST00000369747 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 OGTO15294 1046 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 CAPN2P17655 700 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 CETN1Q12798 172 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 GPNMBQ14956 572 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 ARHGAP44Q17R89 818 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 ARHGEF19Q8IW93 802 aa18.6■□□□□ 0.57
UBE3D-203ENST00000369747 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 ATP8B1O43520 1251 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 NPTXRO95502 500 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 MXI1P50539 228 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 WNT7BP56706 349 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 VSNL1P62760 191 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 PAK2Q13177 524 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 SLC27A1Q6PCB7 646 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 HNRNPLLQ8WVV9 542 aaKnown RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 ERVK-5Q9HDB9 667 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 TBX21Q9UL17 535 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 ZNF233A6NK53 670 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 FOXN3O00409 490 aaPredicted RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 KIAA0391O15091 583 aaKnown RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 GPR182O15218 404 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 NBNO60934 754 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 LDHAP00338 332 aaKnown RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 MCF2P10911 925 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 AXLP30530 894 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 CXCR5P32302 372 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 CYP2C18P33260 490 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 FMNL3Q8IVF7 1028 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 KRT222Q8N1A0 295 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 CCDC127Q96BQ5 260 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 SCLYQ96I15 445 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 PSMB7Q99436 277 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 POP1Q99575 1024 aaKnown RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 ADPGKQ9BRR6 497 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 UBE2TQ9NPD8 197 aaPredicted RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 CPSF3Q9UKF6 684 aaKnown RBP18.59■□□□□ 0.57
UBE3D-203ENST00000369747 HES2Q9Y543 173 aa18.59■□□□□ 0.57
UBE3D-203ENST00000369747 SASH3O75995 380 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 FTCDO95954 541 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 CLTBP09497 229 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 CCL23P55773 120 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 CYP24A1Q07973 514 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 UBXN11Q5T124 520 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 MEI1Q5TIA1 1274 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 TWF2Q6IBS0 349 aaKnown RBP18.58■□□□□ 0.56
UBE3D-203ENST00000369747 MFSD14AQ96MC6 490 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 KIAA1586Q9HCI6 787 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 TMEM39AQ9NV64 488 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 RBAKQ9NYW8 714 aaPredicted RBP18.58■□□□□ 0.56
UBE3D-203ENST00000369747 INTUQ9ULD6 942 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 SQORQ9Y6N5 450 aa18.58■□□□□ 0.56
UBE3D-203ENST00000369747 TET1Q8NFU7 2136 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 LRRIQ3A6PVS8 624 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 MGEA5O60502 916 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 CCDC172P0C7W6 258 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 ITIH3Q06033 890 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 C2orf54Q08AI8 447 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 LONRF2Q1L5Z9 754 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 WDR93Q6P2C0 686 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 GLYCTKQ8IVS8 523 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 USP38Q8NB14 1042 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 FAM84AQ96KN4 292 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 NXF3Q9H4D5 531 aaKnown RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 MEFVO15553 781 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 TUBBP07437 444 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 H2AFZP0C0S5 128 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 STAG3L1P0CL83 205 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 BEND6Q5SZJ8 279 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 H2AFVQ71UI9 128 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 TMC2Q8TDI7 906 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 FUT8Q9BYC5 575 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms