RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 HPS3Q969F9 1004 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 ASB7Q9H672 318 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 FAM13BQ9NYF5 915 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 EXOC7Q9UPT5 735 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 M0QZQ0 153 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 ACTN4O43707 911 aaKnown RBP22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 RFPL2O75678 378 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 GARTP22102 1010 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 KRT85P78386 507 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 SLC8B1Q6J4K2 584 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 ANKS3Q6ZW76 656 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 GLYCTKQ8IVS8 523 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 ZSWIM2Q8NEG5 633 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 ZDHHC7Q9NXF8 308 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 USTQ9Y2C2 406 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 C2CD2Q9Y426 696 aa22.32■■□□□ 1.16
SMNDC1-201ENST00000369592 NOTCH4Q99466 2003 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 CCDC195A0A1B0GUA6 201 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 ZMYND10O75800 440 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 PRPF6O94906 941 aaKnown RBP22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 NFICP08651 508 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 SLFN14P0C7P3 912 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 GUCY2FP51841 1108 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 VARS2Q5ST30 1063 aaKnown RBP22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 JADE1Q6IE81 842 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 UNC13DQ70J99 1090 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 ZNF507Q8TCN5 953 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 POMGNT1Q8WZA1 660 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 PYM1Q9BRP8 204 aaKnown RBP22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 MUTYHQ9UIF7 546 aa22.31■■□□□ 1.16
SMNDC1-201ENST00000369592 ANO9A1A5B4 782 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 C2CD4DB7Z1M9 353 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 PIRO00625 290 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 PPEF2O14830 753 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 CASP1P29466 404 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 OR1D2P34982 312 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 WNT7BP56706 349 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 ASIC1P78348 528 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 ZDHHC14Q8IZN3 488 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 PRKD2Q9BZL6 878 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 TMEM206Q9H813 350 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 NR2E1Q9Y466 385 aa22.3■■□□□ 1.16
SMNDC1-201ENST00000369592 PVALEFA0A1B0GWK0 134 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 EIF3DO15371 548 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 XPOTO43592 962 aaKnown RBP22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 KLRC4O43908 158 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 ABLIM3O94929 683 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 POU2F2P09086 479 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 PFKFB1P16118 471 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 HOXA9P31269 272 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 CUL4BQ13620 913 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 BECN1Q14457 450 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 EFCAB13Q8IY85 973 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 CBWD1Q9BRT8 395 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 WDR6Q9NNW5 1121 aaKnown RBP22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 SERTAD1Q9UHV2 236 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 PCDHB8Q9UN66 801 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 NUB1Q9Y5A7 615 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 ATP6V1DQ9Y5K8 247 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 CDY1Q9Y6F8 540 aa22.29■■□□□ 1.16
SMNDC1-201ENST00000369592 TMEM132DQ14C87 1099 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 FAM26FQ5R3K3 315 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 C9orf57Q5W0N0 161 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 RTL10Q7L3V2 364 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 BRSK2Q8IWQ3 736 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 PAGE5Q96GU1 130 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 SCAND2PQ9GZW5 306 aaPredicted RBP22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 TSC2P49815 1807 aa22.28■■□□□ 1.16
SMNDC1-201ENST00000369592 A0A1B0GVL5 298 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 A0A1W2PQ27 194 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 A0A1W2PQ64 194 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 A0A1W2PQD8 194 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 SPTLC1O15269 473 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 TGFB1I1O43294 461 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 N4BP1O75113 896 aaKnown RBP22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 OAZ2O95190 189 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 IL18RAPO95256 599 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 HNRNPA1P09651 372 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 PAX3P23760 479 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 MCM4P33991 863 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 LILRA4P59901 499 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 ROR1Q01973 937 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 BMT2Q1RMZ1 405 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 UVSSAQ2YD98 709 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 NT5DC4Q86YG4 428 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 GRAMD1CQ8IYS0 662 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 BEST2Q8NFU1 509 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 ZNF461Q8TAF7 563 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 CXorf38Q8TB03 319 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 SCFD1Q8WVM8 642 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 SMG7Q92540 1137 aaKnown RBP22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 EDAQ92838 391 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 USP25Q9UHP3 1055 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 FBXL5Q9UKA1 691 aa22.27■■□□□ 1.16
SMNDC1-201ENST00000369592 WDR27A2RRH5 827 aa22.26■■□□□ 1.15
SMNDC1-201ENST00000369592 EXTL3O43909 919 aa22.26■■□□□ 1.15
SMNDC1-201ENST00000369592 LDHAP00338 332 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms