RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 UPP2O95045 317 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 FLT3LGP49771 235 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 TFAMQ00059 246 aaKnown RBP11.4□□□□□ -0.58
TPM3-212ENST00000368533 PRKCZQ05513 592 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 DGKDQ16760 1214 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 ZNF394Q53GI3 561 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 TTMPQ5BVD1 217 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 IER5Q5VY09 327 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 SCARA5Q6ZMJ2 495 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 APOL6Q9BWW8 343 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 AP1M1Q9BXS5 423 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 PRPF4BQ13523 1007 aaKnown RBP11.4□□□□□ -0.59
TPM3-212ENST00000368533 MAATS1Q7Z4T9 603 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 ABRAQ8N0Z2 381 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 LMBR1Q8WVP7 490 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 OSMRQ99650 979 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 MTMR12Q9C0I1 747 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 HES2Q9Y543 173 aa11.4□□□□□ -0.59
TPM3-212ENST00000368533 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
TPM3-212ENST00000368533 FSBPO95073 299 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 SGPL1O95470 568 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 FAM153BP0C7A2 387 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
TPM3-212ENST00000368533 CXCL8P10145 99 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 MYBL1P10243 752 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 STAT1P42224 750 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 PIK3CAP42336 1068 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 CETN1Q12798 172 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 TRADDQ15628 312 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 FAM153CQ494X1 144 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 FAM47CQ5HY64 1035 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
TPM3-212ENST00000368533 KRT39Q6A163 491 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 EMBQ6PCB8 327 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 SLC47A2Q86VL8 602 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 KREMEN1Q96MU8 473 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 HAUS2Q9NVX0 235 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 AIPL1Q9NZN9 384 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 FAM153AQ9UHL3 310 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 GRID2IPA4D2P6 1211 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 KRT19P08727 400 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 GBP2P32456 591 aaPredicted RBP11.39□□□□□ -0.59
TPM3-212ENST00000368533 SOX5P35711 763 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 TNNC1P63316 161 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 PAK2Q13177 524 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 ORC1Q13415 861 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 RUFY4Q6ZNE9 571 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 PEX26Q7Z412 305 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 TRPV1Q8NER1 839 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 TRIB2Q92519 343 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 CCDC114Q96M63 670 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 IFT122Q9HBG6 1241 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 RAB20Q9NX57 234 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
TPM3-212ENST00000368533 EXTL3O43909 919 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 CD58P19256 250 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 NFIL3Q16649 462 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 MARCH8Q5T0T0 291 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 MTHFD1LQ6UB35 978 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 CXCL17Q6UXB2 119 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 DAAM2Q86T65 1068 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 KIAA0319LQ8IZA0 1049 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 ZNF483Q8TF39 744 aaPredicted RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 DNAJB3Q8WWF6 145 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 MRPL4Q9BYD3 311 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 GJD2Q9UKL4 321 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 A0A0B4J269 797 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM3-212ENST00000368533 TREHO43280 583 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 H2AFZP0C0S5 128 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 RGS2P41220 211 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 JAM2P57087 298 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 RTP1P59025 263 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 ITIH3Q06033 890 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 MXD4Q14582 209 aaPredicted RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 IFI16Q16666 785 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 MEI1Q5TIA1 1274 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 H2AFVQ71UI9 128 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 FBXL13Q8NEE6 735 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 THOC1Q96FV9 657 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 ACO2Q99798 780 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 SH3GL2Q99962 352 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 SH3BP1Q9Y3L3 701 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 GPR25O00155 361 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 RTN2O75298 545 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 CTSHP09668 335 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms