RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 ATP1A2P50993 1020 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 ZNF132P52740 706 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 NLRP11P59045 1033 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 NOMO3P69849 1222 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 POU5F1BQ06416 359 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 NCOA4Q13772 614 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 SIX1Q15475 284 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 MAPK6Q16659 721 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 PTPROQ16827 1216 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 DUOXA2Q1HG44 320 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 DRICH1Q6PGQ1 229 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 RELL1Q8IUW5 271 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 DHX37Q8IY37 1157 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 RCOR2Q8IZ40 523 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 RIBC1Q8N443 379 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 RBBP8NLQ8NC74 664 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 TMEM35BQ8NCS4 154 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 ZSWIM2Q8NEG5 633 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 FBXO25Q8TCJ0 367 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 ZNF473Q8WTR7 871 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 GLG1Q92896 1179 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 WNK4Q96J92 1243 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 SERPINB12Q96P63 405 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 CCT8L2Q96SF2 557 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 SH2D3AQ9BRG2 576 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 PDGFDQ9GZP0 370 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 NSRP1Q9H0G5 558 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 ACTR5Q9H9F9 607 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 GGA3Q9NZ52 723 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 BCCIPQ9P287 314 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM3-209ENST00000368527 NOVA2Q9UNW9 492 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 CNTNAP2Q9UHC6 1331 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 GSTTP1A0A1W2PQM5 241 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 C5orf60A6NFR6 353 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 E7EVH7 732 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 SMAPO00193 183 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 MEFVO15553 781 aaPredicted RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 MED7O43513 233 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 ASS1P00966 412 aaKnown RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 ATF2P15336 505 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 HPDP32754 393 aaPredicted RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 NR1H3Q13133 447 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 DGKZQ13574 1117 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 PIGHQ14442 188 aaPredicted RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 CRELD2Q6UXH1 353 aaPredicted RBP10.87□□□□□ -0.67
TPM3-209ENST00000368527 ZNF365Q70YC5 407 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 TADA2BQ86TJ2 420 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 OTUD6BQ8N6M0 293 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 FEZF2Q8TBJ5 459 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 ASAP3Q8TDY4 903 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 TMEM143Q96AN5 459 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 SCLT1Q96NL6 688 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 PLCD4Q9BRC7 762 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 NFKBIZQ9BYH8 718 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 DCLK3Q9C098 648 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 PHACTR1Q9C0D0 580 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 MIS12Q9H081 205 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 SPATC1LQ9H0A9 340 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 PLEKHA4Q9H4M7 779 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 CCDC134Q9H6E4 229 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 EFR3BQ9Y2G0 817 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 NR2E1Q9Y466 385 aa10.87□□□□□ -0.67
TPM3-209ENST00000368527 COL11A1P12107 1806 aaPredicted RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 IGKV6-21A0A0C4DH24 114 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 RASGRF2O14827 1237 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 RIPK2O43353 540 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 TJP3O95049 919 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 VNN1O95497 513 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 TNNC2P02585 160 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 ATP4AP20648 1035 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 MMP8P22894 467 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 RRM1P23921 792 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 CDH5P33151 784 aaPredicted RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 NF2P35240 595 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 MMP13P45452 471 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 MARCKSL1P49006 195 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 MAGOHP61326 146 aaKnown RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 GUCY1A3Q02108 690 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 TNFAIP2Q03169 654 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 KRT17Q04695 432 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 TRPC3Q13507 836 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 CAPSQ13938 189 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 GKAP1Q5VSY0 366 aaPredicted RBP10.86□□□□□ -0.67
TPM3-209ENST00000368527 TTC27Q6P3X3 843 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 SEPT14Q6ZU15 432 aa10.86□□□□□ -0.67
TPM3-209ENST00000368527 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms