RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CYP2W1Q8TAV3 490 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 EAF1Q96JC9 268 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 PANX2Q96RD6 677 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 SLC26A6Q9BXS9 759 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 FTOQ9C0B1 505 aaKnown RBP eCLIP7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 KIAA1683Q9H0B3 1180 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 NSUN3Q9H649 340 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 SH3GLB2Q9NR46 395 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 ATP8A2Q9NTI2 1148 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 RMND1Q9NWS8 449 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 LRP2BPQ9P2M1 347 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 DNAI1Q9UI46 699 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 HERC5Q9UII4 1024 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 CD207Q9UJ71 328 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 INPP5FQ9Y2H2 1132 aa7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 DIS3Q9Y2L1 958 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-202ENST00000368289 CACNA1IQ9P0X4 2223 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 LRRC10BA6NIK2 292 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 LAD1O00515 517 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 NFICP08651 508 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 FCER1AP12319 257 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ZNF18P17022 549 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 KIF5BP33176 963 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 KRT2P35908 639 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 PLCD1P51178 756 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 DMTNQ08495 405 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 PAK2Q13177 524 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 TBX2Q13207 712 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ORC2Q13416 577 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 SEC23AQ15436 765 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 SBK1Q52WX2 424 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 E4F1Q66K89 784 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 SPECC1LQ69YQ0 1117 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ARMCX5Q6P1M9 558 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 HID1Q8IV36 788 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 SLITRK4Q8IW52 837 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 KRT222Q8N1A0 295 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ANKRD20A12PQ8NF67 263 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ATG4CQ96DT6 458 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 RPGRIP1Q96KN7 1286 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 PPP1R13BQ96KQ4 1090 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 PHF20Q9BVI0 1012 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 SEMA6CQ9H3T2 930 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 MROH8Q9H579 483 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 MYO1AQ9UBC5 1043 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 FBXO2Q9UK22 296 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ADAM30Q9UKF2 790 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ZHX1Q9UKY1 873 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 PCDHA5Q9Y5H7 936 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.17□□□□□ -1.261e-7■■■■■ 27.3
ECHDC1-202ENST00000368289 ABCA12Q86UK0 2595 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 MROH7-TTC4A0A0A0MT08 1334 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ITIH6Q6UXX5 1313 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 ASXL3Q9C0F0 2248 aa7.17□□□□□ -1.26
ECHDC1-202ENST00000368289 DNAJC25-GNG10A0A024R161 153 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 GRM6O15303 877 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 RANBP6O60518 1105 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 BAIAP3O94812 1187 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 GLP2RO95838 553 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 PGRP06401 933 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ACTN1P12814 892 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 SMARCA1P28370 1054 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 MARCKSP29966 332 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 CDK8P49336 464 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 HTRA4P83105 476 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 GPM6BQ13491 265 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ACVR2BQ13705 512 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 COG2Q14746 738 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 NR1I3Q14994 352 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 LONRF3Q496Y0 759 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 SEZ6Q53EL9 994 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 SPATA1Q5VX52 437 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 HOMER1Q86YM7 354 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 CNGA4Q8IV77 575 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 REXO1Q8N1G1 1221 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 IQUBQ8NA54 791 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 CTCFLQ8NI51 663 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 UBXN4Q92575 508 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 RUBCNQ92622 972 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ISL2Q96A47 359 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 GPRASP2Q96D09 838 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 MMP19Q99542 508 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 LZTS2Q9BRK4 669 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 HSD3B7Q9H2F3 369 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ACBD3Q9H3P7 528 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 CUEDC2Q9H467 287 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 MAGEF1Q9HAY2 307 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ZNF287Q9HBT7 754 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 INCENPQ9NQS7 918 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 FAM53CQ9NYF3 392 aa7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 ARPP21Q9UBL0 812 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-202ENST00000368289 BTBD18B2RXH4 712 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms