RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ELMO2Q96JJ3 720 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 HPS4Q9NQG7 708 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 RAB6BQ9NRW1 208 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 NAGPAQ9UK23 515 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 PTPRMP28827 1452 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 CAV1Q03135 178 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 POLR3CQ9BUI4 534 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 LSM7Q9UK45 103 aaKnown RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 PDS5AQ29RF7 1337 aaKnown RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 NCAM1P13591 858 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 GUCY2CP25092 1073 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 ST8SIA6P61647 398 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 LONRF1Q17RB8 773 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 TLR2O60603 784 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 DCTN3O75935 186 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 RHOBTB3O94955 611 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 GFAPP14136 432 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 CPT1AP50416 773 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 PTK2BQ14289 1009 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 C10orf120Q5SQS8 335 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 C1orf146Q5VVC0 180 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 TTC39CQ8N584 583 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 XPO7Q9UIA9 1087 aaKnown RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 LCMT1Q9UIC8 334 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 ZFXP17010 805 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 FCGRTP55899 365 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SOX10P56693 466 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SLC26A7Q8TE54 656 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 NT5C1AQ9BXI3 368 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 RGL2O15211 777 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ASAP2O43150 1006 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 CAP2P40123 477 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 RFC5P40937 340 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 RAP1GAPP47736 663 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 PPP2R2AP63151 447 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 TAP1Q03518 808 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SLC30A10Q6XR72 485 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ARP10275 920 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 TRIM15Q9C019 465 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 MAGEB2O15479 319 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ZNF286BP0CG31 522 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SRGNP10124 158 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 STMN1P16949 149 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 EFTUD2Q15029 972 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 TBCCQ15814 346 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SV2CQ496J9 727 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SPATA4Q8NEY3 305 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 TRIM4Q9C037 500 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 FGFR1OP2Q9NVK5 253 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 MRFAP1Q9Y605 127 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 LUC7L3O95232 432 aaKnown RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 HNRNPCL2B2RXH8 293 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 HNRNPCL1O60812 293 aaKnown RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 SREBF2Q12772 1141 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 C9orf72Q96LT7 481 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 TUBB6Q9BUF5 446 aa13.56□□□□□ -0.24
PTPRK-207ENST00000368226 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-207ENST00000368226 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 EXTL3O43909 919 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 HBP1O60381 514 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 PRMT1Q99873 361 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 TIPINQ9BVW5 301 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 C3orf70A6NLC5 250 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 TMCC1O94876 653 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 HAUS5O94927 633 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 EPHX2P34913 555 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 ARFIP2P53365 341 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 ATXN3P54252 364 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 C1orf131Q8NDD1 294 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 OR2W6PQ8NHA6 318 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 OTULINQ96BN8 352 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 MED15Q96RN5 788 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 SUFUQ9UMX1 484 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 CHMP2BQ9UQN3 213 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 TBX3O15119 743 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 DDNO94850 711 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms