RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 LPCAT2Q7L5N7 544 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 INPP5DQ92835 1189 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 MAP3K14Q99558 947 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
SHPRH-202ENST00000367503 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.34
SHPRH-202ENST00000367503 AIM2O14862 343 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 PTDSS1P48651 473 aaKnown RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 NDNQ99608 321 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 KLF6Q99612 283 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 EYA4O95677 639 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 CSF1RP07333 972 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 OCM2P0CE71 109 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 OCMP0CE72 109 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 SLC1A1P43005 524 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 XRCC4Q13426 336 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ATP1A4Q13733 1029 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TRIM73Q86UV7 250 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 MRPL1Q9BYD6 325 aaKnown RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 STK33Q9BYT3 514 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 MYLK2Q9H1R3 596 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 GH2P01242 217 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 KCTD2Q14681 263 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TERB1Q8NA31 727 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 HSPH1Q92598 858 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 PGM2Q96G03 612 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TAC1P20366 129 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 FNTAP49354 379 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ARHGDIAP52565 204 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 KRT76Q01546 638 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 BBS5Q8N3I7 341 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ARL10Q8N8L6 244 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 BLOC1S6Q9UL45 172 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-202ENST00000367503 ALG6Q9Y672 507 aa12.89□□□□□ -0.35
SHPRH-202ENST00000367503 KRT7P08729 469 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 IGBP1P78318 339 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 JADE3Q92613 823 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 APBA3O96018 575 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 PTK7Q13308 1070 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 KLHDC7AQ5VTJ3 777 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 SH3GL1Q99961 368 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 PAIP1Q9H074 479 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 LRRC4Q9HBW1 653 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 A0A087X0T9 212 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 LOC100653049A0A140TA62 436 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF839A8K0R7 811 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 SNX3O60493 162 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 KRT34O76011 436 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ASNSP08243 561 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 FAM228BP0C875 321 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 S100A5P33763 92 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 RIPK1Q13546 671 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 EFHC1Q5JVL4 640 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 TMEM270Q6UE05 265 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 MREGQ8N565 214 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 AGR3Q8TD06 166 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 COQ7Q99807 217 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 DRD4P21917 467 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms