RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PDGFRBP09619 1106 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 CHRNA5P30532 468 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 SERPINB9P50453 376 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 UCMAQ8WVF2 138 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 MLXIPLQ9NP71 852 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.47■□□□□ 0.233e-15■■■□□ 18.3
NUCKS1-201ENST00000367142 RRN3P2A6NIE6 340 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 H7C4K7 107 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 CLASP2O75122 1294 aaKnown RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 CYP2C9P11712 490 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 CASP1P29466 404 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 ARHGAP31Q2M1Z3 1444 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 MYO1GB0I1T2 1018 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 SRP72O76094 671 aaKnown RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 HEATR9A2RTY3 570 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 SLC26A4O43511 780 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 ANKMY2Q8IV38 441 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 DDX47Q9H0S4 455 aaKnown RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 PKD2L2Q9NZM6 624 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 APOA4P06727 396 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 MZF1P28698 734 aaPredicted RBP16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 PCSK7Q16549 785 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 C10orf120Q5SQS8 335 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 MFSD4BQ5TF39 518 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 FAM162AQ96A26 154 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
NUCKS1-201ENST00000367142 NCOA4Q13772 614 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 KCNB1Q14721 858 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 ANKS6Q68DC2 871 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 CHSY1Q86X52 802 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 PRPF18Q99633 342 aaKnown RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 ADNPQ9H2P0 1102 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 CYP27B1O15528 508 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 WDR47O94967 919 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 EPB42P16452 691 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 SLC9A1P19634 815 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 NMT1P30419 496 aaKnown RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 CINPQ9BW66 212 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 OSBPL10Q9BXB5 764 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 KCND2Q9NZV8 630 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 IPPQ9Y573 584 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 PRR23D1E9PI22 279 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 PRR23D2P0DMB1 279 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 HUNKP57058 714 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 NFIXQ14938 502 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 ATF7IP2Q5U623 682 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 SLC25A41Q8N5S1 370 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 TSEN34Q9BSV6 310 aaKnown RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 FKBP9O95302 570 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 TOB2Q14106 344 aaPredicted RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 HIC1Q14526 733 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 FKBP9P1Q75LS8 142 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 EFL1Q7Z2Z2 1120 aaKnown RBP16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 VPS37AQ8NEZ2 397 aa16.46■□□□□ 0.23
NUCKS1-201ENST00000367142 TBC1D4O60343 1298 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 ENTPD3O75355 529 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 PDIA5Q14554 519 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 PDK1Q15118 436 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 ZRANB3Q5FWF4 1079 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 TNIP2Q8NFZ5 429 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 NT5C1AQ9BXI3 368 aa16.46■□□□□ 0.22
NUCKS1-201ENST00000367142 DDHD2O94830 711 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 CDH18Q13634 790 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 DEPDC1Q5TB30 811 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 CHST13Q8NET6 341 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 APOL5Q9BWW9 433 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 CELF2O95319 508 aaKnown RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ACOT2P49753 483 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 MYL2P10916 166 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 PNPLA4P41247 253 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 PPP1R36Q96LQ0 422 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 MPP6Q9NZW5 540 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 CRLS1Q9UJA2 301 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 SLC25A13Q9UJS0 675 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 GMNCA6NCL1 334 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 FAM47E-STBD1D6RA91 191 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms