RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 COL20A1Q9P218 1284 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 GTF3C4Q9UKN8 822 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 TESPA1A2RU30 521 aaPredicted RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 PYGMP11217 842 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 ENPEPQ07075 957 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 SHC3Q92529 594 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 COQ4Q9Y3A0 265 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 GOLGA8IPA6NC78 632 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 GOLGA8JA6NMD2 632 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.11e-18■■■■■ 66.9
PRKN-204ENST00000366896 GCKP35557 465 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 MXI1P50539 228 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 COPS2P61201 443 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 AUHQ13825 339 aaKnown RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 ZNF568Q3ZCX4 644 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 TAOK1Q7L7X3 1001 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 SLC47A2Q86VL8 602 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 SLC13A5Q86YT5 568 aaPredicted RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 ELMO3Q96BJ8 720 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 KREMEN1Q96MU8 473 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 PTPN18Q99952 460 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 MOV10L1Q9BXT6 1211 aaKnown RBP15.67■□□□□ 0.1
PRKN-204ENST00000366896 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 LRRC19Q9H756 370 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 ARHGEF3Q9NR81 526 aa15.67■□□□□ 0.1
PRKN-204ENST00000366896 PDHXO00330 501 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 CYP26A1O43174 497 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 ADRB2P07550 413 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 FGFR4P22455 802 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 RARRES1P49788 294 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 CEP120Q8N960 986 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 ZNF483Q8TF39 744 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 PRCCQ92733 491 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 KLHL29Q96CT2 875 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 GPRC5CQ9NQ84 441 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 KCNH7Q9NS40 1196 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 PTPN22Q9Y2R2 807 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 RASGRF2O14827 1237 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 LIN7AO14910 233 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 DHX15O43143 795 aaKnown RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 RIPK2O43353 540 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 SUN1O94901 812 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 KRT16P08779 473 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 MFAP3P55082 362 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 SIX1Q15475 284 aaPredicted RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 TRMT10CQ7L0Y3 403 aaKnown RBP15.66■□□□□ 0.1
PRKN-204ENST00000366896 CLEC4DQ8WXI8 215 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 SEMA4DQ92854 862 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 BTBD7Q9P203 1132 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 GGT7Q9UJ14 662 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 PNMA3Q9UL41 463 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 RIPK3Q9Y572 518 aa15.66■□□□□ 0.1
PRKN-204ENST00000366896 MANSC4A6NHS7 340 aaPredicted RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 SLCO1A2P46721 670 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 NCKAP1LP55160 1127 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 LLGL1Q15334 1064 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 SNRNP48Q6IEG0 339 aaKnown RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 MIS18BP1Q6P0N0 1132 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 EXOC3L1Q86VI1 746 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 SAMD3Q8N6K7 520 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 TEX13BQ9BXU2 312 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 HOMER3Q9NSC5 361 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 O00370 1275 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 NFIBO00712 420 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 SLC16A4O15374 487 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 PEX10O60683 326 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 CNMDO75829 334 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 CYP2C8P10632 490 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 KCNJ1P48048 391 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 CCNG1P51959 295 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 FMO1Q01740 532 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 CAPRIN2Q6IMN6 1127 aaKnown RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 NSMFQ6X4W1 530 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 ASRGL1Q7L266 308 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 ERICH1Q86X53 443 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 ZNF564Q8TBZ8 553 aaPredicted RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 IFT74Q96LB3 600 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 NUP85Q9BW27 656 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 FGFR1OP2Q9NVK5 253 aa15.65■□□□□ 0.1
PRKN-204ENST00000366896 CORO1CQ9ULV4 474 aaPredicted RBP15.65■□□□□ 0.1
PRKN-204ENST00000366896 A8MUI8 341 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 GJB6O95452 261 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 MSH2P43246 934 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 QARSP47897 775 aaKnown RBP15.64■□□□□ 0.09
PRKN-204ENST00000366896 GPC3P51654 580 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 APLP1P51693 650 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 RWDD2BP57060 319 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 UGCGQ16739 394 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 SYDE1Q6ZW31 735 aaPredicted RBP15.64■□□□□ 0.09
PRKN-204ENST00000366896 HAUS6Q7Z4H7 955 aa15.64■□□□□ 0.09
PRKN-204ENST00000366896 CBWD2Q8IUF1 395 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms