RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 XPAP23025 273 aaPredicted RBP1.95□□□□□ -2.1
MIR539-201ENST00000365690 PTPN7P35236 360 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 HILS1P60008 231 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 LRRC32Q14392 662 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 TRIP6Q15654 476 aaKnown RBP1.95□□□□□ -2.1
MIR539-201ENST00000365690 MST1LQ2TV78 715 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 PRAMEF17Q5VTA0 474 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 DDX53Q86TM3 631 aaKnown RBP1.95□□□□□ -2.1
MIR539-201ENST00000365690 RFX6Q8HWS3 928 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 DCP1BQ8IZD4 617 aaKnown RBP1.95□□□□□ -2.1
MIR539-201ENST00000365690 GALNT16Q8N428 558 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 CAMKK1Q8N5S9 505 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 TOR1AIP2Q8NFQ8 470 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 ZNF480Q8WV37 535 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 NR4A3Q92570 626 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 RFKQ969G6 155 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 TMEM125Q96AQ2 219 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 PGBD1Q96JS3 809 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 MYOCQ99972 504 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 PDGFCQ9NRA1 345 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 INTS13Q9NVM9 706 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 KIAA1522Q9P206 1035 aaPredicted RBP1.95□□□□□ -2.1
MIR539-201ENST00000365690 PCDHB1Q9Y5F3 818 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 PPP2R3BQ9Y5P8 575 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 NUMBLQ9Y6R0 609 aa1.95□□□□□ -2.1
MIR539-201ENST00000365690 ADGRA2Q96PE1 1338 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 FAM90A8PA6NJQ4 464 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 C4orf47A7E2U8 309 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 FAM90A13PP0C7W8 464 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 FAM90A24PP0C7X0 464 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 FCER1AP12319 257 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 ATP2A2P16615 1042 aaKnown RBP1.94□□□□□ -2.1
MIR539-201ENST00000365690 CCT8P50990 548 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 KRTAP10-3P60369 221 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 SP140Q13342 867 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 ZNF460Q14592 562 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 FAM153CQ494X1 144 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 RRP12Q5JTH9 1297 aaKnown RBP1.94□□□□□ -2.1
MIR539-201ENST00000365690 CATSPERGQ6ZRH7 1159 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 ZZZ3Q8IYH5 903 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 NANOGP1Q8N7R0 232 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 COQ8BQ96D53 544 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 TINF2Q9BSI4 451 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 MRPL4Q9BYD3 311 aaKnown RBP1.94□□□□□ -2.1
MIR539-201ENST00000365690 ANO3Q9BYT9 981 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 TRNAU1APQ9NX07 287 aaKnown RBP1.94□□□□□ -2.1
MIR539-201ENST00000365690 MSRAQ9UJ68 235 aa1.94□□□□□ -2.1
MIR539-201ENST00000365690 KDM2BQ8NHM5 1336 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 FNDC1Q4ZHG4 1894 aaPredicted RBP1.93□□□□□ -2.1
MIR539-201ENST00000365690 A0A087WYN8 130 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 ST20-MTHFSA0A0A6YYL1 179 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PRAMEF33A0A0G2JMD5 474 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 FAM83GA6ND36 823 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 IFITM10A6NMD0 228 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 GSG1L2A8MUP6 293 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PRAMEF10O60809 474 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 URI1O94763 535 aaPredicted RBP1.93□□□□□ -2.1
MIR539-201ENST00000365690 OAZ2O95190 189 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PRF1P14222 555 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 JUPP14923 745 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PPP3CBP16298 524 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 FPR1P21462 350 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 ALDH1A3P47895 512 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 SCNN1BP51168 640 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PLCD1P51178 756 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 ARID5AQ03989 594 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 TWIST1Q15672 202 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 CD300EQ496F6 205 aaPredicted RBP1.93□□□□□ -2.1
MIR539-201ENST00000365690 C8orf58Q8NAV2 365 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 NUP133Q8WUM0 1156 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 STON2Q8WXE9 905 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 CLUHP3Q96NS8 147 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 MED15Q96RN5 788 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 PNKPQ96T60 521 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 SLCO5A1Q9H2Y9 848 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 CTTNBP2NLQ9P2B4 639 aa1.93□□□□□ -2.1
MIR539-201ENST00000365690 EME2A4GXA9 379 aaPredicted RBP1.92□□□□□ -2.1
MIR539-201ENST00000365690 SMIM22K7EJ46 135 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 DNAJC8O75937 253 aaPredicted RBP1.92□□□□□ -2.1
MIR539-201ENST00000365690 TOMM40O96008 361 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 RHOP08100 348 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 ATP5JP18859 108 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 CD40P25942 277 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 GUCY1A2P33402 732 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 MANFP55145 182 aaKnown RBP1.92□□□□□ -2.1
MIR539-201ENST00000365690 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 LCE3AQ5TA76 89 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 OTUD7BQ6GQQ9 843 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 ZNF529Q6P280 563 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 UBE3BQ7Z3V4 1068 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 TMPRSS9Q7Z410 1059 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 PIP4P1Q86T03 277 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 CNGA4Q8IV77 575 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 OR7D4Q8NG98 312 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 C16orf52Q8NHV5 167 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 WFIKKN2Q8TEU8 576 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 SSH1Q8WYL5 1049 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 C5orf34Q96MH7 638 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 CCDC113Q9H0I3 377 aa1.92□□□□□ -2.1
MIR539-201ENST00000365690 KLC4Q9NSK0 619 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms