RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NDE1Q9NXR1 346 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 GIT2Q14161 759 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 TTC7BQ86TV6 843 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 INPP5DQ92835 1189 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 TTC17Q96AE7 1141 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SYNCQ9H7C4 482 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 HOMER2Q9NSB8 354 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 MARCOQ9UEW3 520 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 K7ENM7 598 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 DNAJC6O75061 913 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 GALK1P51570 392 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SLC1A5Q15758 541 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 CBWD6Q4V339 395 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 CBWD3Q5JTY5 395 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 CBWD5Q5RIA9 395 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 RGS9BPQ6ZS82 235 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 OTOAQ7RTW8 1153 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ART4Q93070 314 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SHCBP1LQ9BZQ2 653 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 RMI1Q9H9A7 625 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ARFIP2P53365 341 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 EPHB1P54762 984 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 LIN52Q52LA3 116 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 C16orf86Q6ZW13 317 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 CLNKQ7Z7G1 428 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SATL1Q86VE3 508 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 RBM15Q96T37 977 aaKnown RBP eCLIP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 TDRKHQ9Y2W6 561 aaKnown RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 A0A1W2PPM1 405 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ABLIM1O14639 778 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 FUT4P22083 530 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 ABCD1P33897 745 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SERPINB6P35237 376 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 INHBCP55103 352 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 GRAMD1BQ3KR37 738 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 SNF8Q96H20 258 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 BTBD10Q9BSF8 475 aa13.44□□□□□ -0.26
VAMP1-201ENST00000361716 PDGFDQ9GZP0 370 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 METTL14Q9HCE5 456 aaKnown RBP13.44□□□□□ -0.26
VAMP1-201ENST00000361716 RREB1Q92766 1687 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 CYP26A1O43174 497 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 TRPA1O75762 1119 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 ADRA1DP25100 572 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 YARSP54577 528 aaKnown RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 DSG1Q02413 1049 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 Q4G0T1 1027 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 IZUMO3Q5VZ72 239 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 RINLQ6ZS11 566 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 LRRC6Q86X45 466 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 FAM136AQ96C01 138 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 RILPQ96NA2 401 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 INTS2Q9H0H0 1204 aaKnown RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 PPARGC1AQ9UBK2 798 aaKnown RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF232Q9UNY5 417 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 MYO3BQ8WXR4 1341 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 MAGEB3O15480 346 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 GSC2O15499 205 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 GAS7O60861 476 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 KRT4P19013 534 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-201ENST00000361716 NFIAQ12857 509 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 EPHA7Q15375 998 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 WDR72Q3MJ13 1102 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 SYCP2LQ5T4T6 812 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 NUP85Q9BW27 656 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
VAMP1-201ENST00000361716 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 NSL1Q96IY1 281 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 EIF2AK1Q9BQI3 630 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 RXRBP28702 533 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 FMO5P49326 533 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms