RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PBRM1Q86U86 1689 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 F5H423 210 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.576e-6■■□□□ 12.6
CLIP1-203ENST00000361654 MFAP3LO75121 409 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 PALMO75781 387 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TTLL9Q3SXZ7 439 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 AARS2Q5JTZ9 985 aaKnown RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 MFSD4BQ5TF39 518 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 EMBQ6PCB8 327 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CYB5R4Q7L1T6 521 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CRLS1Q9UJA2 301 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TTC7AQ9ULT0 858 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TTC37Q6PGP7 1564 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 NPTXRO95502 500 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 HOXC6P09630 235 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 GUCA1AP43080 201 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 PLD1Q13393 1074 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TMEM259Q4ZIN3 620 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 EPHA10Q5JZY3 1008 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 SNX31Q8N9S9 440 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 A0A0G2JND7 137 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 HEATR9A2RTY3 570 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 APOA4P06727 396 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 EPB42P16452 691 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 NLRP11P59045 1033 aaKnown RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CHMP1BQ7LBR1 199 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CINPQ9BW66 212 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 TMEM60Q9H2L4 133 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 POLD4Q9HCU8 107 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 CACNA2D2Q9NY47 1150 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 LRRC53A6NM62 1247 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TRIM49P0CI25 452 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TRIM49CP0CI26 452 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 CYP2C8P10632 490 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 RGS7P49802 495 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 PDIA2Q13087 525 aaKnown RBP11.5□□□□□ -0.57
CLIP1-203ENST00000361654 IFT88Q13099 833 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 PDK1Q15118 436 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 GRAMD1BQ3KR37 738 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 RCOR2Q8IZ40 523 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 VPS37AQ8NEZ2 397 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 OTULINQ96BN8 352 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 PDE11AQ9HCR9 933 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 DSEQ9UL01 958 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 FAM50BQ9Y247 325 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 PRR23AA6NEV1 266 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NCALDP61601 193 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NNTQ13423 1086 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 KDELC2Q7Z4H8 507 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TADA1Q96BN2 335 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 FOXP2O15409 715 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 SPAG7O75391 227 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 DDHD2O94830 711 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 KRT16P08779 473 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ACOT2P49753 483 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 CLCN6P51797 869 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ZC3H18Q86VM9 953 aaKnown RBP11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 MXRA8Q9BRK3 442 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TMEM39BQ9GZU3 492 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 RNF103-CHMP3A0A140T963 221 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ETFBP38117 255 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NPEPPSP55786 919 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 CUL4AQ13619 759 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 TRIML2Q8N7C3 387 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ENGASEQ8NFI3 743 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 ANLNQ9NQW6 1124 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-203ENST00000361654 CNTNAP4Q9C0A0 1308 aa11.5□□□□□ -0.57
CLIP1-203ENST00000361654 RTN2O75298 545 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 FAM107AO95990 144 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 MCF2P10911 925 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 ANXA11P50995 505 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 NUGGCQ68CJ6 796 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 TMEM161AQ9NX61 479 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 DIAPH2O60879 1101 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms