RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PDK1Q15118 436 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 BOLA3Q53S33 107 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
LDB3-202ENST00000361373 MAML1Q92585 1016 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 CYTH2Q99418 400 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 TRIM15Q9C019 465 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 SLC13A4Q9UKG4 626 aa14.19□□□□□ -0.14
LDB3-202ENST00000361373 KIF1AQ12756 1690 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 PDGFRBP09619 1106 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 OR1G1P47890 313 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 TMEM62Q0P6H9 643 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 CPA5Q8WXQ8 436 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 CCDC124Q96CT7 223 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 FGD4Q96M96 766 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 FRMD8Q9BZ67 464 aaPredicted RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 GTF3C4Q9UKN8 822 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 DFFAO00273 331 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 PHF2O75151 1096 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 DDX5P17844 614 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 LIG3P49916 1009 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
LDB3-202ENST00000361373 PPATQ06203 517 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 SNCBQ16143 134 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 C1orf54Q8WWF1 131 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 OPTNQ96CV9 577 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 CHP1Q99653 195 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 H7C4K7 107 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 WNT10BO00744 389 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 SPAG6O75602 509 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 ATP1A1P05023 1023 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 RGS7P49802 495 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 ZC3H18Q86VM9 953 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 ATPAF2Q8N5M1 289 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 PPHLN1Q8NEY8 458 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 RAPGEF5Q92565 580 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 ARHGEF26Q96DR7 871 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 GBP5Q96PP8 586 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 AGPAT5Q9NUQ2 364 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 MOSPD1Q9UJG1 213 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 GOLGA8MH3BSY2 632 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 ZNF197O14709 1029 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
LDB3-202ENST00000361373 TACO1Q9BSH4 297 aaKnown RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 PACSIN2Q9UNF0 486 aaPredicted RBP14.18□□□□□ -0.14
LDB3-202ENST00000361373 MED24O75448 989 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 ARP10275 920 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 GPD1P21695 349 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 ALDH1A3P47895 512 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 RUSC1Q9BVN2 902 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 VTA1Q9NP79 307 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 ZFATQ9P243 1243 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 MROH2AA6NES4 1674 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 TYK2P29597 1187 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 CUL2Q13617 745 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 NTRK3Q16288 839 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 AGO4Q9HCK5 861 aaKnown RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 DPP3Q9NY33 737 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 ALDH7A1P49419 539 aaKnown RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 FIGNQ5HY92 759 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 TRMT10CQ7L0Y3 403 aaKnown RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 ADGRA1Q86SQ6 560 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 RAB42Q8N4Z0 105 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 EXT2Q93063 718 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 TMEM169Q96HH4 297 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 FAM129AQ9BZQ8 928 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 KCNQ5Q9NR82 932 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 PAK5Q9P286 719 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 HPSEQ9Y251 543 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 BRAFP15056 766 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 THPOP40225 353 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 DDR1Q08345 913 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 NOP9Q86U38 636 aaKnown RBP14.17□□□□□ -0.14
LDB3-202ENST00000361373 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 OLFML3Q9NRN5 406 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 DSEQ9UL01 958 aa14.17□□□□□ -0.14
LDB3-202ENST00000361373 MROH1Q8NDA8 1641 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 NPTX2P47972 431 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
LDB3-202ENST00000361373 RASSF3Q86WH2 238 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 FEZF2Q8TBJ5 459 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 TSSK1BQ9BXA7 367 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDB3-202ENST00000361373 KCNN4O15554 427 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 TC2NQ8N9U0 490 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 PDZD8Q8NEN9 1154 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 NSMCE4AQ9NXX6 385 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
LDB3-202ENST00000361373 PPP2R2AP63151 447 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 CENPCQ03188 943 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms