RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FGFR4P22455 802 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 OR1G1P47890 313 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 QARSP47897 775 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 BYSLQ13895 437 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 CHD1LQ86WJ1 897 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 LEO1Q8WVC0 666 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PCED1AQ9H1Q7 454 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 DNAJC25Q9H1X3 360 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 C6orf50Q9HD87 102 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 DIAPH3Q9NSV4 1193 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 HCFC1R1Q9NWW0 138 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCL16O15467 120 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 SERPINF2P08697 491 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 ELF2Q15723 593 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 ITPRIPL2Q3MIP1 535 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TRMT2BQ96GJ1 504 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 C2orf40Q9H1Z8 148 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PDZD7Q9H5P4 517 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 HPS4Q9NQG7 708 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 CEP72Q9P209 647 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TCEAL9Q9UHQ7 104 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRC1O43663 620 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 SEC24AO95486 1093 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 POMCP01189 267 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 MRPS21P82921 87 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PTH1RQ03431 593 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 GAB4Q2WGN9 574 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TXNDC11Q6PKC3 985 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRSS55Q6UWB4 352 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 PALB2Q86YC2 1186 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 KCTD17Q8N5Z5 321 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 SNIP1Q8TAD8 396 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 EZH1Q92800 747 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TMEM209Q96SK2 561 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 HSD17B14Q9BPX1 270 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 IL21Q9HBE4 155 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 C2orf42Q9NWW7 574 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TAF6LQ9Y6J9 622 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TEX51A0A1B0GUA7 166 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 OR6C75A6NL08 312 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 F8W810 466 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 GIPC1O14908 333 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 DGAT1O75907 488 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 GDI1P31150 447 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 GRM5P41594 1212 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 NAPAP54920 295 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 AMPD2Q01433 879 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 ORC2Q13416 577 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CAPSQ13938 189 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 EMC2Q15006 297 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZBTB6Q15916 424 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 TTC22Q5TAA0 569 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC148Q8NFR7 591 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CSGALNACT1Q8TDX6 532 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 LRRC3BQ96PB8 259 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 TMEM206Q9H813 350 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 RALYQ9UKM9 306 aaKnown RBP6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CKAP5Q14008 2032 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 C4orf47A7E2U8 309 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 TADA2AO75478 443 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 THP07101 528 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCNE1P24864 410 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 PCSK4Q6UW60 755 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CHMP4CQ96CF2 233 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 MYRFLQ96LU7 910 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC38A7Q9NVC3 462 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 ASIC1P78348 528 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC6Q16204 474 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 LRCH2Q5VUJ6 765 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 CEP68Q76N32 757 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 OTUD6AQ7L8S5 288 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 RHPN2Q8IUC4 686 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 PHTF2Q8N3S3 785 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 RFFLQ8WZ73 363 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 TASP1Q9H6P5 420 aa6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 WRAP73Q9P2S5 460 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-201ENST00000360515 NCBP1Q09161 790 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 SRSF5Q13243 272 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 GPR17Q13304 367 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 RTP5Q14D33 572 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 SMAD1Q15797 465 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 DUOXA1Q1HG43 343 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 COL28A1Q2UY09 1125 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 MAP7D1Q3KQU3 841 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 CWC27Q6UX04 472 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 Q6ZS52 159 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 PDZD4Q76G19 769 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 LURAP1LQ8IV03 231 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 MTRQ99707 1265 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 TMEM134Q9H6X4 195 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 TOR4AQ9NXH8 423 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms