RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 HIC1Q14526 733 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 ADCK5Q3MIX3 580 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 LY9Q9HBG7 655 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 USE1Q9NZ43 259 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PSMA4P25789 261 aaKnown RBP10.15□□□□□ -0.79
CUX1-203ENST00000360264 GCLMP48507 274 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 ARFIP2P53365 341 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 ATP6V1G3Q96LB4 118 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 STK33Q9BYT3 514 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 DSEQ9UL01 958 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 ASMTLO95671 621 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 PAK5Q9P286 719 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 CDC27P30260 824 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 PDIA2Q13087 525 aaKnown RBP10.15□□□□□ -0.79
CUX1-203ENST00000360264 RESTQ13127 1097 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 HORMAD1Q86X24 394 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 PIGBQ92521 554 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 CD209Q9NNX6 404 aa10.15□□□□□ -0.79
CUX1-203ENST00000360264 LRRC53A6NM62 1247 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 SRGAP2O75044 1071 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 RIBC1Q8N443 379 aaPredicted RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 BRD8Q9H0E9 1235 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 ATP11BQ9Y2G3 1177 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 ERBB3P21860 1342 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 SLFNL1Q499Z3 407 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 SHCBP1Q8NEM2 672 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 HINFPQ9BQA5 517 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CCDC134Q9H6E4 229 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 BMP10O95393 424 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 ABCB6Q9NP58 842 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 GABBR1Q9UBS5 961 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 FKBP9O95302 570 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 ODC1P11926 461 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 MCAMP43121 646 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CEP78Q5JTW2 689 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 FKBP9P1Q75LS8 142 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 RAVER2Q9HCJ3 691 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 ARHGEF38Q9NXL2 777 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 SEC31AO94979 1220 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 HOXC6P09630 235 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CCDC159P0C7I6 412 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CYFIP1Q7L576 1253 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 KCNK16Q96T55 309 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 PDXKO00764 312 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 KRT17Q04695 432 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 XPO6Q96QU8 1125 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 ADNPQ9H2P0 1102 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CEP290O15078 2479 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 RRM2P31350 389 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 YWHABP31946 246 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 PDS5AQ29RF7 1337 aaKnown RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 RBBP8Q99708 897 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 MYL2P10916 166 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CDH18Q13634 790 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 DDX42Q86XP3 938 aaKnown RBP eCLIP10.14□□□□□ -0.79
CUX1-203ENST00000360264 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 TRABDQ9H4I3 376 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 ANXA9O76027 345 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 POLBP06746 335 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 PLD1Q13393 1074 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 CLEC4FQ8N1N0 589 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 FBXL5Q9UKA1 691 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 C21orf2O43822 256 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 PNMA6AP0CW24 399 aaPredicted RBP10.14□□□□□ -0.79
CUX1-203ENST00000360264 GARTP22102 1010 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 GRAMD1CQ8IYS0 662 aa10.14□□□□□ -0.79
CUX1-203ENST00000360264 METP08581 1390 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MYO1GB0I1T2 1018 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MAFGO15525 162 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 SULT1E1P49888 294 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 TRIM71Q2Q1W2 868 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 CACHD1Q5VU97 1274 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DCTN4Q9UJW0 460 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MAGEA9P43362 315 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 UNC45BQ8IWX7 931 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 C19orf60Q96EN9 201 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 HEMGNQ9BXL5 484 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 SIK2Q9H0K1 926 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 HSPA13P48723 471 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 NLRP14Q86W24 1093 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 ARMC7Q9H6L4 198 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 PRMT7Q9NVM4 692 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 AKAP6Q13023 2319 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 H7C1W4 665 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 LRG1P02750 347 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 TXNP10599 105 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 KCNK10P57789 538 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DEFA1P59665 94 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DEFA3P59666 94 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms